Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_O01
(360 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 28 1.7
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 27 3.0
Z82261-2|CAB05145.1| 336|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z82261-1|CAB05144.1| 336|Caenorhabditis elegans Hypothetical pr... 27 5.2
AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm rece... 26 6.9
Z81496-10|CAB04066.2| 324|Caenorhabditis elegans Hypothetical p... 26 9.1
Z78016-6|CAB01441.1| 336|Caenorhabditis elegans Hypothetical pr... 26 9.1
U88170-7|AAO26016.1| 403|Caenorhabditis elegans Pantothenate ki... 26 9.1
U88170-5|AAB42246.2| 449|Caenorhabditis elegans Pantothenate ki... 26 9.1
AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine re... 26 9.1
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -1
Query: 294 PQTHKIFKMSNKSL-LPV---FLKLTNCIIISPSSTHVFNYLILYI 169
P + KMSN LPV FLK++N I P + +F+ ++YI
Sbjct: 345 PVIYIFLKMSNSIFDLPVIYIFLKMSNSIFKLPMNNSIFDLPVIYI 390
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -1
Query: 294 PQTHKIFKMSNKSL-LPV---FLKLTNCIIISPSSTHVFNYLILYI 169
P + KM+N LPV FLK++N I P S +F+ ++YI
Sbjct: 450 PVIYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPMSNSIFDLPVIYI 495
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 12 KRHVINKM*NGRIIQRYIFDILKHEL 89
+RH++ II RY+ D+LKH +
Sbjct: 99 ERHILENYEYSMIIHRYVNDVLKHAI 124
>Z82261-2|CAB05145.1| 336|Caenorhabditis elegans Hypothetical
protein C35D6.2 protein.
Length = 336
Score = 26.6 bits (56), Expect = 5.2
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -3
Query: 208 FIHSCLQLFDSVYKSLRIFTTKRKK---KMKHDVYKSLCLTLC--NSCLRMSKIYL*MIR 44
F +CL LF +Y++LR + R K +++ ++K++ L L S + M IY
Sbjct: 206 FCVTCLALFLQIYRALRKYGEVRSKQTLELQKRLFKAIFLQLAIPFSIISMPMIYYTYTP 265
Query: 43 PFYILLITCLFL 8
F +L + +F+
Sbjct: 266 FFNAILNSIMFI 277
>Z82261-1|CAB05144.1| 336|Caenorhabditis elegans Hypothetical
protein C35D6.1 protein.
Length = 336
Score = 26.6 bits (56), Expect = 5.2
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -3
Query: 208 FIHSCLQLFDSVYKSLRIFTTKRKK---KMKHDVYKSLCLTLC--NSCLRMSKIYL*MIR 44
F +CL LF +Y++LR + R K +++ ++K++ L L S + M IY
Sbjct: 206 FCVTCLALFLQIYRALRKYGEVRSKQTLELQKRLFKAIFLQLAIPFSIISMPMIYYTYTP 265
Query: 43 PFYILLITCLFL 8
F +L + +F+
Sbjct: 266 FFNAILNSIMFI 277
>AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm
receptor protein 68 protein.
Length = 337
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 220 HNISFIHSCLQLFDSVYKSLRIFTTKRKKKMKHDVYKSLCLTL 92
H I I+ CL++ S+ K L F+T+ +K + + + TL
Sbjct: 209 HYIIIIYCCLRMHFSMKKELAKFSTQNQKLQRQFFHALIVQTL 251
>Z81496-10|CAB04066.2| 324|Caenorhabditis elegans Hypothetical
protein F09C6.7 protein.
Length = 324
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 214 ISFIHSCLQLFDSVYKSLRIFTTKRKKKMKHDVYKS 107
++F +C L+ ++Y + FTTK + MK+ +Y S
Sbjct: 13 LAFFITCSLLYFTMYILIFNFTTKDLRTMKYFLYPS 48
>Z78016-6|CAB01441.1| 336|Caenorhabditis elegans Hypothetical
protein R186.2a protein.
Length = 336
Score = 25.8 bits (54), Expect = 9.1
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 41 ILHFINYVPFFT 6
++HFI Y+PFFT
Sbjct: 255 VMHFIFYIPFFT 266
>U88170-7|AAO26016.1| 403|Caenorhabditis elegans Pantothenate
kinase protein 1,isoform c protein.
Length = 403
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 151 TTKRKKKMKHDVYKSLCLTLCNSCLRMSKIY 59
TTK+++ D+ KSL L + N+ +M+ +Y
Sbjct: 309 TTKKQQHKPEDIAKSLLLMVSNNIGQMAYLY 339
>U88170-5|AAB42246.2| 449|Caenorhabditis elegans Pantothenate
kinase protein 1,isoform a protein.
Length = 449
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 151 TTKRKKKMKHDVYKSLCLTLCNSCLRMSKIY 59
TTK+++ D+ KSL L + N+ +M+ +Y
Sbjct: 355 TTKKQQHKPEDIAKSLLLMVSNNIGQMAYLY 385
>AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 64 protein.
Length = 319
Score = 25.8 bits (54), Expect = 9.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 208 FIHSCLQLFDSVYKSLRIFTTKRKKKMKHDVYKSLCLTLCNSCL 77
F +CL LF ++Y + FTT K M+ +Y S TL + L
Sbjct: 15 FSLTCLCLFITLYILIYKFTTSILKTMRFFLYASNTATLISVVL 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,393,179
Number of Sequences: 27780
Number of extensions: 128720
Number of successful extensions: 340
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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