Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_N19
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026206-1|AAK39306.1|  260|Caenorhabditis elegans Hypothetical ...    29   5.3  
Z29094-15|CAA82341.3|  672|Caenorhabditis elegans Hypothetical p...    28   9.3  

>AF026206-1|AAK39306.1|  260|Caenorhabditis elegans Hypothetical
           protein T28B4.2 protein.
          Length = 260

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 201 IEYET*INSLIINYFFCVYYSTF 133
           +E+ET I S  + YFFC++Y  F
Sbjct: 1   MEWETQIFSHTVPYFFCIFYMIF 23


>Z29094-15|CAA82341.3|  672|Caenorhabditis elegans Hypothetical
           protein C07A9.11 protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 588 TILMILFLIQSLQFRTFCFYIY--LKIYYPLFNFNQCYLLF 472
           TI  +LF + +L F  FCF  Y  + ++ PL  F   YLL+
Sbjct: 195 TIRDLLFYLVALSFLAFCFVFYNRVTLWMPL-TFLGLYLLY 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,960,510
Number of Sequences: 27780
Number of extensions: 279496
Number of successful extensions: 588
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)