Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_N17
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 312 2e-85
12_01_0877 - 8415186-8415272,8415696-8416310 31 0.76
09_04_0180 + 15367737-15367755,15368874-15369739 30 1.8
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 30 1.8
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 30 2.3
05_03_0039 - 7621613-7622695 30 2.3
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414... 29 3.1
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 4.1
05_03_0040 - 7646525-7647775 29 4.1
05_07_0031 - 27183252-27183317,27183542-27184282 29 5.4
08_02_0478 + 17621678-17623768 28 7.1
05_05_0311 - 24004380-24004440,24004685-24004756,24004875-240049... 28 7.1
11_06_0610 - 25449085-25453284 28 9.4
11_01_0133 + 1121392-1122731,1123417-1123858 28 9.4
08_01_0346 - 3063440-3064189 28 9.4
05_03_0033 - 7585267-7586028 28 9.4
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 28 9.4
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 312 bits (767), Expect = 2e-85
Identities = 155/196 (79%), Positives = 170/196 (86%)
Frame = -3
Query: 699 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 520
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 519 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 340
RIRELTSVVQKRFN PE VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 339 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 160
F+MESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQGVLGI
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGI 186
Query: 159 QGQXHVAVGPARQERP 112
+ + + P ++ P
Sbjct: 187 KVKIMLDWDPKGKQGP 202
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 158 KVKXMLPWDQQGKNGPKKPQPDHRLVTEPKDEPVPLEP-TSEVRARA 21
KVK ML WD +GK GP P PD + PKDE +P T+E+ A
Sbjct: 187 KVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEIPVAA 233
>12_01_0877 - 8415186-8415272,8415696-8416310
Length = 233
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 122 KNGPKKPQPDHRLVTEPKDE-PVPLEPTSEVRAR-APAPMPQ 3
K PK P P EP+ P P EPT VR +PAP P+
Sbjct: 158 KEEPKPPSPPREAEPEPEPPLPPPEEPTPLVRNEPSPAPTPE 199
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 104 PQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMP 6
P+PD L EP+ EP P EP E P P P
Sbjct: 157 PEPDPELEPEPEPEPDP-EPEPEPPTPKPIPTP 188
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +1
Query: 190 MSGSSVDVIITRVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTY 369
+ GS +++ T V R D +++Y+ G ++ +NN +++G HD N I
Sbjct: 746 IDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGNVIGQGDQ 805
Query: 370 SETSDKLVS 396
++ +S
Sbjct: 806 DSEKNRYLS 814
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 216 HYKGLQSGS*VHL-QTSLIWHVDHA-----ACQIQQLHNH 317
HY GS + + +TSL+WH + A +CQ ++L +H
Sbjct: 657 HYSDATDGSYIEVKETSLVWHYEEADPDFGSCQAKELQDH 696
>05_03_0039 - 7621613-7622695
Length = 360
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 116 GPK-KPQPDHRLVTEPKDEPVPLEPTSEVRAR-APAPMPQ 3
GPK KP+PD +L +P EP P P E + P P P+
Sbjct: 283 GPKPKPKPDPKLEPKPHPEPKP-HPMPEPEPKPKPEPKPE 321
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 122 KNGPKK-PQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMPQ 3
K PK P+P+ +L EPK EP P EP + + P P P+
Sbjct: 221 KPEPKPHPEPEPKLKPEPKPEPKP-EPEPKPEPK-PEPKPE 259
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 140 PWDQQGKNGPK-KPQPDHRLVTEPKDEPVPLEP 45
P + + K PK KP P H EPK EP P EP
Sbjct: 53 PPELEPKPKPKPKPHPKHESKPEPKPEPKP-EP 84
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 134 DQQGKNGPK-KPQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMPQ 3
+ + K PK +P+P+ + +PK EP P+ + P P P+
Sbjct: 245 EPEPKPEPKPEPKPEPKPYPKPKPEPKPVPKPKPIPHPGPKPKPK 289
>05_04_0322 +
20239793-20240127,20240176-20240728,20241317-20241425,
20244456-20244723,20244943-20245197,20245594-20246539
Length = 821
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 442 GGYSWSLRYRPG-RISKIQAYRRSRCTSCLLWC 347
G SWS RY+ ISK Y RC C++ C
Sbjct: 665 GALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +3
Query: 258 TSLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 362
T L H AA Q H HGH G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280
>05_03_0040 - 7646525-7647775
Length = 416
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 134 DQQGKNGPK-KPQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMPQ 3
+ + K PK +P+P+ + EPK EP P EP E + P P P+
Sbjct: 121 EPEPKPEPKPEPKPEPKPYPEPKPEPKP-EPKPEPKPE-PKPKPE 163
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 122 KNGPK-KPQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMPQ 3
K PK +P+P+ + EPK EP P EP E + P P P+
Sbjct: 93 KPEPKPEPKPEPKPYPEPKPEPKP-EPKPEPEPK-PEPKPE 131
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 140 PWDQQGKNGPKKPQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMPQ 3
P+ + KP+P EPK EP P EP E + P P P+
Sbjct: 238 PYPEPKPKPEPKPEPKPEPKPEPKPEPKP-EPKPEPKPE-PKPKPE 281
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 107 KPQPDHRLVTEPKDEPVPL-EPTSEVRARAPAPMPQ 3
KP+P+ + V EP+ +P P EP E + P P P+
Sbjct: 75 KPEPEPKPVPEPEPKPEPKPEPKPEPKPE-PKPYPE 109
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 107 KPQPDHRLVTEPKDEPVPLEPTSEVRAR-APAPMPQ 3
KP P+ + EPK EP P EP E + P P P+
Sbjct: 237 KPYPEPKPKPEPKPEPKP-EPKPEPKPEPKPEPKPE 271
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 122 KNGPK-KPQPDHRLVTEPKDEPVPLEPTSEVRAR-APAPMPQ 3
K PK KP+P EPK EP P EP E + P P P+
Sbjct: 273 KPEPKPKPEPKPHPKPEPKPEPKP-EPKPEPKPEPKPEPKPE 313
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 113 PKKPQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMP 6
P P P T K E +P E SE +AP P P
Sbjct: 119 PPPPPPPPPPTTTTKPESLPAEADSEPELKAPPPPP 154
>08_02_0478 + 17621678-17623768
Length = 696
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 261 KFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 166
K + GL+IHSG ND+V+++ + + G++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGII 452
>05_05_0311 -
24004380-24004440,24004685-24004756,24004875-24004946,
24005155-24005298,24005535-24005606,24006057-24006286
Length = 216
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 568 DLRADGSDPHFHAGVAVLGQLPSEELIEFRLENPISNKFSLL*NIVHGHDCNGS 729
DL H A +A L QL E+ +E PI +F L N++ CN +
Sbjct: 78 DLEEMNLSGHLSADLARLDQLQFMEIASNNIEGPIPPEFGNLENLISLDLCNNT 131
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 140 PWDQQGKNGPKKPQPDHRLVTEPKDEPVPLE---PTSEVRARAPAP 12
P + + P P P+ + + PK P P+E PT E A +P P
Sbjct: 685 PTPESESSSPPPPAPEGHMPSPPKSTP-PVEKSPPTPESEASSPPP 729
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -1
Query: 113 PKKPQPDHRLVTEPKDEPVPLEPTSEVRARAPAPMPQ 3
P P P H + P D P P + V A P P PQ
Sbjct: 135 PPPPPPSHPALLPP-DATAPPPPPTSVAALPPPPPPQ 170
>08_01_0346 - 3063440-3064189
Length = 249
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 408 AESLRYKLIGGLAVRRACYGVLR 340
A S L+GG A ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243
>05_03_0033 - 7585267-7586028
Length = 253
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 128 QGKNGPK-KPQPDHRLVTEPKDEPVPLEPTSE 36
+ K+ PK +P+P L EPK EP EP SE
Sbjct: 128 EAKSEPKSEPKPKSELYAEPKSEP-KSEPQSE 158
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = -3
Query: 372 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 193
A R A G++ + + G G SG+ RGQ +++ ++G + +Y++ A
Sbjct: 472 AARLAAAGIVGILKKLGRDGSGAASSGRGRGQPRRTVVAIEGGLYQGYPVFREYLDEALV 531
Query: 192 HVL 184
+L
Sbjct: 532 EIL 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,732,883
Number of Sequences: 37544
Number of extensions: 453436
Number of successful extensions: 1701
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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