Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_N15
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       74   1e-15
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.3  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.5  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   9.9  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   9.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 74.1 bits (174), Expect = 1e-15
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
 Frame = -3

Query: 790 DRIXNMDFEVEVDKIL---RVIPR-ERHTYLFSATMTKKVQKLQRASLQDPVKVEVSTKY 623
           DR+ +M F   ++K++    ++P  ER T +FSAT   +VQ L R  L + + + V    
Sbjct: 357 DRMLDMGFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVG 416

Query: 622 QTVDKLMQSYIFIPVKFKDVYLVHILNEMAGNSFI----VFVSTXXXXXXXXXXXXXXXX 455
                + Q++  +    K   L  IL     +  +    VFV                  
Sbjct: 417 GACSDVEQNFYEVARNKKKDLLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNY 476

Query: 454 XAVPLHGQMSQNKRLAALNKFKSKSRSVLICTDVASRGLDIPHVDVVINLDIPLHSKDYI 275
               +HG   Q +R  AL  FKS   S+L+ T VA+RGLDI +V  VIN D+P    +Y+
Sbjct: 477 PTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYV 536

Query: 274 HRVXXXXXXXXXGKAITF 221
           HR+         G+A +F
Sbjct: 537 HRIGRTGRVGNRGRATSF 554


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 397 KFKSKSRSVLICTDVASRGLDIPHVDVVI 311
           K K K RS++    ++ RGL I H D  I
Sbjct: 91  KQKKKKRSLMGAQGLSIRGLQINHEDETI 119


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/51 (21%), Positives = 19/51 (37%)
 Frame = -1

Query: 537 WLETRLSSSSRRAPVRCAVHYCSETWVWPRYRYTVRCLRINVSQP*TNSRA 385
           W + R+ + +R+ P      +    W W   R      +    QP  N R+
Sbjct: 148 WRDARIVNGTRQPPNNWLSVFWGSAWQWNEERKQYYLHQFATGQPDLNYRS 198


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/47 (17%), Positives = 23/47 (48%)
 Frame = -3

Query: 685 VQKLQRASLQDPVKVEVSTKYQTVDKLMQSYIFIPVKFKDVYLVHIL 545
           V ++  +++  PV+ ++S+           Y+F+PV +    +  ++
Sbjct: 798 VPQVNDSTILSPVREKLSSSQPMQPPQQNPYMFLPVSYMSTTMAGVI 844


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 628 KYQTVDKLMQSYIFIPVKFKDVYLVHILNEMAGNSFI 518
           K+  V +L+++Y F   K  +  L H+++  +   FI
Sbjct: 382 KHVEVARLIRNYYFESNKIDETTLKHLIDVASDRFFI 418


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 628 KYQTVDKLMQSYIFIPVKFKDVYLVHILNEMAGNSFI 518
           K+  V +L+++Y F   K  +  L H+++  +   FI
Sbjct: 382 KHVEVARLIRNYYFESNKIDETTLKHLIDVASDRFFI 418


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 697 MTKKVQKLQRASLQDPVKVEVSTKYQTVDKL 605
           MT +  K+Q   +Q+  K E     QTVD +
Sbjct: 17  MTIEELKIQLRDVQEICKAESGIDQQTVDDI 47


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 628 KYQTVDKLMQSYIFIPVKFKDVYLVHILNEMAGNSFIVFVST 503
           K+QTV  +  +      +  D   V  L E + N  +V +ST
Sbjct: 80  KFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHIST 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,260
Number of Sequences: 438
Number of extensions: 3476
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)