Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_N01
(541 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457097-1|CAG33378.1| 106|Homo sapiens ATPIF1 protein. 55 2e-07
BT009849-1|AAP88851.1| 106|Homo sapiens ATPase inhibitory facto... 55 2e-07
BC009677-1|AAH09677.1| 106|Homo sapiens ATPase inhibitory facto... 55 2e-07
BC004955-1|AAH04955.1| 87|Homo sapiens ATPIF1 protein protein. 55 2e-07
AY005470-1|AAF97495.1| 106|Homo sapiens ASI protein. 55 2e-07
AL353622-3|CAI19134.1| 106|Homo sapiens ATPase inhibitory facto... 55 2e-07
AF114836-1|AAP97235.1| 106|Homo sapiens ATP synthase inhibitor ... 55 2e-07
AB029042-1|BAA88422.1| 106|Homo sapiens ATPase inhibitor precur... 55 2e-07
BC112121-1|AAI12122.1| 478|Homo sapiens growth arrest-specific ... 34 0.37
BC104785-1|AAI04786.1| 478|Homo sapiens growth arrest-specific ... 34 0.37
AK124118-1|BAC85777.1| 157|Homo sapiens protein ( Homo sapiens ... 34 0.37
AF050079-1|AAC69519.1| 478|Homo sapiens growth arrest specific ... 34 0.37
AF050078-1|AAC69518.1| 478|Homo sapiens growth arrest specific ... 34 0.37
U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP... 31 2.6
CR533556-1|CAG38587.1| 789|Homo sapiens TAX1BP1 protein. 31 2.6
CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein. 31 2.6
BC050358-1|AAH50358.1| 789|Homo sapiens Tax1 (human T-cell leuk... 31 2.6
AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein pr... 31 2.6
AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T... 31 2.6
AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein. 31 2.6
AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein. 31 2.6
AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein. 31 2.6
X64838-1|CAA46050.1| 1427|Homo sapiens restin protein. 31 3.4
M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker protei... 31 3.4
BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein. 31 3.4
BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein. 31 3.4
BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containi... 31 3.4
AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a varian... 31 3.4
BC126208-1|AAI26209.1| 1161|Homo sapiens SMC1B protein protein. 29 7.9
AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance ... 29 7.9
AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance ... 29 7.9
AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein. 29 7.9
>CR457097-1|CAG33378.1| 106|Homo sapiens ATPIF1 protein.
Length = 106
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 47 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 99
>BT009849-1|AAP88851.1| 106|Homo sapiens ATPase inhibitory factor 1
protein.
Length = 106
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 47 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 99
>BC009677-1|AAH09677.1| 106|Homo sapiens ATPase inhibitory factor 1
protein.
Length = 106
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 47 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 99
>BC004955-1|AAH04955.1| 87|Homo sapiens ATPIF1 protein protein.
Length = 87
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 28 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 80
>AY005470-1|AAF97495.1| 106|Homo sapiens ASI protein.
Length = 106
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 47 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 99
>AL353622-3|CAI19134.1| 106|Homo sapiens ATPase inhibitory factor 1
protein.
Length = 106
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 47 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 99
>AF114836-1|AAP97235.1| 106|Homo sapiens ATP synthase inhibitor
protein protein.
Length = 106
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 47 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 99
>AB029042-1|BAA88422.1| 106|Homo sapiens ATPase inhibitor precursor
protein.
Length = 106
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 246 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
FGK E A E+ YF + +EQLA LK H +EI H+++I+R + I RHK+++
Sbjct: 47 FGKREQAEEERYFRAQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKI 99
>BC112121-1|AAI12122.1| 478|Homo sapiens growth arrest-specific 8
protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.37
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -2
Query: 204 KKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 73
K+Q E + + HL +E+A Q KR D +++ +E+MS+++K
Sbjct: 252 KEQMEDMRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK 295
>BC104785-1|AAI04786.1| 478|Homo sapiens growth arrest-specific 8
protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.37
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -2
Query: 204 KKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 73
K+Q E + + HL +E+A Q KR D +++ +E+MS+++K
Sbjct: 252 KEQMEDMRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK 295
>AK124118-1|BAC85777.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ42124 fis, clone TESTI2009477, weakly similar
to TRICHOHYALIN. ).
Length = 157
Score = 33.9 bits (74), Expect = 0.37
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = -2
Query: 225 REDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQM 88
R+ E KQKEQ+A + + K+ +EQ+++ E+ +R+ +EQM
Sbjct: 36 RKQEKQMLKQKEQMAEQEEQMQKQ----EEQVRKQEEQVRKQEEQM 77
Score = 30.3 bits (65), Expect = 4.5
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = -2
Query: 234 EAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*TGH 55
E E E +KQ+EQ+ + + K+ +EQ+ + E+ +R+ +EQM EK G
Sbjct: 47 EQMAEQEEQMQKQEEQVRKQEEQVRKQ----EEQMWKQEEQMRKQEEQMRKQEKQM--GE 100
Query: 54 RE*EFSKA*EYSYKTKK 4
+E + K E K ++
Sbjct: 101 QEEQMRKREEQMRKREE 117
>AF050079-1|AAC69519.1| 478|Homo sapiens growth arrest specific 11
protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.37
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -2
Query: 204 KKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 73
K+Q E + + HL +E+A Q KR D +++ +E+MS+++K
Sbjct: 252 KEQMEDMRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK 295
>AF050078-1|AAC69518.1| 478|Homo sapiens growth arrest specific 11
protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.37
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -2
Query: 204 KKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 73
K+Q E + + HL +E+A Q KR D +++ +E+MS+++K
Sbjct: 252 KEQMEDMRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK 295
>U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP151
protein.
Length = 747
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 201 KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 67
K+KE+L L L KE A +EQ+ R E + KE+ ++ Q
Sbjct: 159 KEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQ 203
>CR533556-1|CAG38587.1| 789|Homo sapiens TAX1BP1 protein.
Length = 789
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 201 KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 67
K+KE+L L L KE A +EQ+ R E + KE+ ++ Q
Sbjct: 159 KEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQ 203
>CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein.
Length = 747
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 201 KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 67
K+KE+L L L KE A +EQ+ R E + KE+ ++ Q
Sbjct: 159 KEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQ 203
>BC050358-1|AAH50358.1| 789|Homo sapiens Tax1 (human T-cell
leukemia virus type I) binding protein 1 protein.
Length = 789
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 201 KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 67
K+KE+L L L KE A +EQ+ R E + KE+ ++ Q
Sbjct: 159 KEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQ 203
>AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein
protein.
Length = 992
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Frame = -2
Query: 228 AREDEYFYKKQKEQLANLKGHLNKEI------------AFHQEQIKRHEDAIRRHKEQ 91
A+ E + ++++Q A L GHL E+ QEQ KR ED RRH+EQ
Sbjct: 637 AKAREQYEAEERKQRAELLGHLTGELERLQRAHERELETVRQEQHKRLEDLRRRHREQ 694
>AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens
cDNA FLJ44007 fis, clone TESTI4023762. ).
Length = 842
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Frame = -2
Query: 228 AREDEYFYKKQKEQLANLKGHLNKEI------------AFHQEQIKRHEDAIRRHKEQ 91
A+ E + ++++Q A L GHL E+ QEQ KR ED RRH+EQ
Sbjct: 745 AKAREQYEAEERKQRAELLGHLTGELERLQRAHERELETVRQEQHKRLEDLRRRHREQ 802
>AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T6BP
protein.
Length = 747
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 201 KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 67
K+KE+L L L KE A +EQ+ R E + KE+ ++ Q
Sbjct: 159 KEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQ 203
>AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein.
Length = 747
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 201 KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 67
K+KE+L L L KE A +EQ+ R E + KE+ ++ Q
Sbjct: 159 KEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQ 203
>AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein.
Length = 596
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 201 KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 67
K+KE+L L L KE A +EQ+ R E + KE+ ++ Q
Sbjct: 8 KEKEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQ 52
>AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein.
Length = 1456
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Frame = -2
Query: 228 AREDEYFYKKQKEQLANLKGHLNKEI------------AFHQEQIKRHEDAIRRHKEQ 91
A+ E + ++++Q A L GHL E+ QEQ KR ED RRH+EQ
Sbjct: 867 AKAREQYEAEERKQRAELLGHLTGELERLQRAHERELETVRQEQHKRLEDLRRRHREQ 924
>X64838-1|CAA46050.1| 1427|Homo sapiens restin protein.
Length = 1427
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 240 KMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*T 61
K+ A E+ F +K E + +K ++ QE K+HE+ + + ++SD+EK T
Sbjct: 953 KLTKANENASFLQKSIEDMT-VKAEQSQ-----QEAAKKHEEEKKELERKLSDLEKKMET 1006
Query: 60 GHRE*EFSKA 31
H + + KA
Sbjct: 1007 SHNQCQELKA 1016
>M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker protein-170
alpha-2 protein.
Length = 1392
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 240 KMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*T 61
K+ A E+ F +K E + +K ++ QE K+HE+ + + ++SD+EK T
Sbjct: 918 KLTKANENASFLQKSIEDMT-VKAEQSQ-----QEAAKKHEEEKKELERKLSDLEKKMET 971
Query: 60 GHRE*EFSKA 31
H + + KA
Sbjct: 972 SHNQCQELKA 981
>BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 240 KMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*T 61
K+ A E+ F +K E + +K ++ QE K+HE+ + + ++SD+EK T
Sbjct: 964 KLTKANENASFLQKSIEDMT-VKAEQSQ-----QEAAKKHEEEKKELERKLSDLEKKMET 1017
Query: 60 GHRE*EFSKA 31
H + + KA
Sbjct: 1018 SHNQCQELKA 1027
>BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 240 KMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*T 61
K+ A E+ F +K E + +K ++ QE K+HE+ + + ++SD+EK T
Sbjct: 964 KLTKANENASFLQKSIEDMT-VKAEQSQ-----QEAAKKHEEEKKELERKLSDLEKKMET 1017
Query: 60 GHRE*EFSKA 31
H + + KA
Sbjct: 1018 SHNQCQELKA 1027
>BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containing
linker protein 1 protein.
Length = 1392
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 240 KMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*T 61
K+ A E+ F +K E + +K ++ QE K+HE+ + + ++SD+EK T
Sbjct: 918 KLTKANENASFLQKSIEDMT-VKAEQSQ-----QEAAKKHEEEKKELERKLSDLEKKMET 971
Query: 60 GHRE*EFSKA 31
H + + KA
Sbjct: 972 SHNQCQELKA 981
>AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a variant
protein.
Length = 1065
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 240 KMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*T 61
K+ A E+ F +K E + +K ++ QE K+HE+ + + ++SD+EK T
Sbjct: 589 KLTKANENASFLQKSIEDMT-VKAEQSQ-----QEAAKKHEEEKKELERKLSDLEKKMET 642
Query: 60 GHRE*EFSKA 31
H + + KA
Sbjct: 643 SHNQCQELKA 652
>BC126208-1|AAI26209.1| 1161|Homo sapiens SMC1B protein protein.
Length = 1161
Score = 29.5 bits (63), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -2
Query: 216 EYFYKKQKEQLANLK-GHLNKEIAFHQEQIKRHEDAIRRHKEQ 91
+ ++ ++K L N K H+N++++ +E + HE+ ++ K++
Sbjct: 227 QLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHHENIVKARKKE 269
>AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance of
chromosomes 1B protein.
Length = 1235
Score = 29.5 bits (63), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -2
Query: 216 EYFYKKQKEQLANLK-GHLNKEIAFHQEQIKRHEDAIRRHKEQ 91
+ ++ ++K L N K H+N++++ +E + HE+ ++ K++
Sbjct: 227 QLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHHENIVKARKKE 269
>AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance of
chromosomes 1B protein.
Length = 1235
Score = 29.5 bits (63), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -2
Query: 216 EYFYKKQKEQLANLK-GHLNKEIAFHQEQIKRHEDAIRRHKEQ 91
+ ++ ++K L N K H+N++++ +E + HE+ ++ K++
Sbjct: 227 QLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHHENIVKARKKE 269
>AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein.
Length = 1235
Score = 29.5 bits (63), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -2
Query: 216 EYFYKKQKEQLANLK-GHLNKEIAFHQEQIKRHEDAIRRHKEQ 91
+ ++ ++K L N K H+N++++ +E + HE+ ++ K++
Sbjct: 227 QLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHHENIVKARKKE 269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,270,689
Number of Sequences: 237096
Number of extensions: 1095752
Number of successful extensions: 3175
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3170
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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