Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_M23
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069339-1|AAL39484.1|  425|Drosophila melanogaster LD05321p pro...    30   2.7  
AE014134-2338|AAF53292.1|  425|Drosophila melanogaster CG6565-PA...    30   2.7  
AE014296-2333|AAF49781.3|  804|Drosophila melanogaster CG17364-P...    29   6.2  

>AY069339-1|AAL39484.1|  425|Drosophila melanogaster LD05321p
           protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 365 PGNEMCRRCRSKQANQCYLKRESQSTQTNNSLDS 466
           P N++C RC++K+   CY +  +Q  +   S  S
Sbjct: 117 PNNQLCDRCQAKKMKYCYCQLGNQRCKKGQSQPS 150


>AE014134-2338|AAF53292.1|  425|Drosophila melanogaster CG6565-PA
           protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 365 PGNEMCRRCRSKQANQCYLKRESQSTQTNNSLDS 466
           P N++C RC++K+   CY +  +Q  +   S  S
Sbjct: 117 PNNQLCDRCQAKKMKYCYCQLGNQRCKKGQSQPS 150


>AE014296-2333|AAF49781.3|  804|Drosophila melanogaster CG17364-PA,
           isoform A protein.
          Length = 804

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 657 SNLKSYSYLNFSKTRQRYEIRRTFVSEKARRTERVYLPPN 538
           S+++SYS + F K  Q+ EIR+      AR  ++ +L  N
Sbjct: 665 SSVRSYSMMRFEKETQQKEIRQEMKLRLARLQQQQHLTQN 704


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,738,859
Number of Sequences: 53049
Number of extensions: 547345
Number of successful extensions: 1220
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)