Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_M22
(829 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p pro... 341 7e-94
BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p pro... 338 4e-93
AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA... 338 4e-93
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 29 7.8
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 29 7.8
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 29 7.8
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 29 7.8
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 29 7.8
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 29 7.8
>BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p
protein.
Length = 327
Score = 341 bits (838), Expect = 7e-94
Identities = 164/264 (62%), Positives = 193/264 (73%)
Frame = -3
Query: 827 VGRDYEXKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKI 648
VGRD+E KNFK+ DVHV+G RIARI RE GVERFIHLS LN E +PK L +K S W
Sbjct: 51 VGRDFETKNFKFKDVHVNGAERIARIAREAGVERFIHLSSLNVEANPKDLYVKGGSEWLK 110
Query: 647 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 468
SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R MPL+ G TVKQPV
Sbjct: 111 SKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPV 170
Query: 467 FVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKY 288
+VSDVAQ I+NAA+D D+ +YQAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++
Sbjct: 171 YVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRW 230
Query: 287 DPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVTLTHMEDQVPW 108
DP LK L + I P P+G LH IEREA +D V+ GVPTLEDLGVTLT ME QVPW
Sbjct: 231 DPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTGVPTLEDLGVTLTTMEQQVPW 290
Query: 107 ELKPFRAHQYYMDRLGEFPKPDPP 36
EL+P+RA YY LGEF P PP
Sbjct: 291 ELRPYRAALYYDAELGEFETPSPP 314
>BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p
protein.
Length = 324
Score = 338 bits (832), Expect = 4e-93
Identities = 163/264 (61%), Positives = 192/264 (72%)
Frame = -3
Query: 827 VGRDYEXKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKI 648
VGRD+E KNFK+ DVHV+G RIARI RE GVER IHLS LN E +PK L +K S W
Sbjct: 48 VGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEANPKDLYVKGGSEWLK 107
Query: 647 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 468
SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R MPL+ G TVKQPV
Sbjct: 108 SKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPV 167
Query: 467 FVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKY 288
+VSDVAQ I+NAA+D D+ +YQAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++
Sbjct: 168 YVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRW 227
Query: 287 DPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVTLTHMEDQVPW 108
DP LK L + I P P+G LH IEREA +D V+ GVPTLEDLGVTLT ME QVPW
Sbjct: 228 DPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTGVPTLEDLGVTLTTMEQQVPW 287
Query: 107 ELKPFRAHQYYMDRLGEFPKPDPP 36
EL+P+RA YY LGEF P PP
Sbjct: 288 ELRPYRAALYYDAELGEFETPSPP 311
>AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA
protein.
Length = 416
Score = 338 bits (832), Expect = 4e-93
Identities = 163/264 (61%), Positives = 192/264 (72%)
Frame = -3
Query: 827 VGRDYEXKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKI 648
VGRD+E KNFK+ DVHV+G RIARI RE GVER IHLS LN E +PK L +K S W
Sbjct: 140 VGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEANPKDLYVKGGSEWLK 199
Query: 647 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 468
SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R MPL+ G TVKQPV
Sbjct: 200 SKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPV 259
Query: 467 FVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKY 288
+VSDVAQ I+NAA+D D+ +YQAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++
Sbjct: 260 YVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRW 319
Query: 287 DPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVTLTHMEDQVPW 108
DP LK L + I P P+G LH IEREA +D V+ GVPTLEDLGVTLT ME QVPW
Sbjct: 320 DPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTGVPTLEDLGVTLTTMEQQVPW 379
Query: 107 ELKPFRAHQYYMDRLGEFPKPDPP 36
EL+P+RA YY LGEF P PP
Sbjct: 380 ELRPYRAALYYDAELGEFETPSPP 403
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 572 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 402
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 1202 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 1256
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 572 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 402
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 572 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 402
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 24 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 78
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 572 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 402
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 572 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 402
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 572 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 402
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,283,053
Number of Sequences: 53049
Number of extensions: 900946
Number of successful extensions: 2838
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2838
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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