BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_M10
(373 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071228-1|AAL48850.1| 326|Drosophila melanogaster RE26822p pro... 27 7.9
AY071015-1|AAL48637.1| 121|Drosophila melanogaster RE09339p pro... 27 7.9
AJ973479-1|CAJ01526.1| 121|Drosophila melanogaster hypothetical... 27 7.9
AJ697736-1|CAG26929.1| 121|Drosophila melanogaster putative che... 27 7.9
AE014297-2781|AAG22161.1| 355|Drosophila melanogaster CG5085-PA... 27 7.9
AE013599-4002|AAF47307.1| 121|Drosophila melanogaster CG9358-PA... 27 7.9
>AY071228-1|AAL48850.1| 326|Drosophila melanogaster RE26822p
protein.
Length = 326
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -1
Query: 205 VLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTFTKTEEKRD 53
V PF S+ + C R DAV SC + +T F K RD
Sbjct: 266 VQPFASLVWRPGPRCIRLLINRDAVGQASCVLFMDPNTRSLLFDKPNNTRD 316
>AY071015-1|AAL48637.1| 121|Drosophila melanogaster RE09339p
protein.
Length = 121
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 322 LVFCVCVTLASAAIQRS 272
LVFCVCV LA+AA +++
Sbjct: 7 LVFCVCVGLAAAAPEKT 23
>AJ973479-1|CAJ01526.1| 121|Drosophila melanogaster hypothetical
protein protein.
Length = 121
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 322 LVFCVCVTLASAAIQRS 272
LVFCVCV LA+AA +++
Sbjct: 7 LVFCVCVGLAAAAPEKT 23
>AJ697736-1|CAG26929.1| 121|Drosophila melanogaster putative
chemosensory protein CSP2 protein.
Length = 121
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 322 LVFCVCVTLASAAIQRS 272
LVFCVCV LA+AA +++
Sbjct: 7 LVFCVCVGLAAAAPEKT 23
>AE014297-2781|AAG22161.1| 355|Drosophila melanogaster CG5085-PA
protein.
Length = 355
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -1
Query: 205 VLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTFTKTEEKRD 53
V PF S+ + C R DAV SC + +T F K RD
Sbjct: 235 VQPFASLVWRPGPRCIRLLINRDAVGQASCVLFMDPNTRSLLFDKPNNTRD 285
>AE013599-4002|AAF47307.1| 121|Drosophila melanogaster CG9358-PA
protein.
Length = 121
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 322 LVFCVCVTLASAAIQRS 272
LVFCVCV LA+AA +++
Sbjct: 7 LVFCVCVGLAAAAPEKT 23
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,828,126
Number of Sequences: 53049
Number of extensions: 346602
Number of successful extensions: 927
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -