Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_M06
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 68 9e-12
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 68 9e-12
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 46 3e-05
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 46 3e-05
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 33 0.23
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 31 0.71
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 31 1.2
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 30 2.2
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 30 2.2
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 29 2.9
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 29 2.9
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 29 2.9
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 29 2.9
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 29 5.0
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 67.7 bits (158), Expect = 9e-12
Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXE--FLPIYSQAKK 614
YD E GKID +GD+ RA PT A + +LP+Y Q K
Sbjct: 16 YDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAK 75
Query: 613 DKDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
+K+QG Y DF E LK++DK E G +L AEL H
Sbjct: 76 EKEQGTYADFYEGLKVFDKEETGKILAAELRH 107
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -2
Query: 522 HTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 394
H LLALGE+L E E+ K ED +GM+ Y F+KKV+A
Sbjct: 107 HILLALGERLSADEADELLKGV---EDGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 67.7 bits (158), Expect = 9e-12
Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXE--FLPIYSQAKK 614
YD E GKID +GD+ RA PT A + +LP+Y Q K
Sbjct: 16 YDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAK 75
Query: 613 DKDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
+K+QG Y DF E LK++DK E G +L AEL H
Sbjct: 76 EKEQGTYADFYEGLKVFDKEETGKILAAELRH 107
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -2
Query: 522 HTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 394
H LLALGE+L E E+ K ED +GM+ Y F+KKV+A
Sbjct: 107 HILLALGERLSADEADELLKGV---EDGEGMVKYEDFIKKVLA 146
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/94 (32%), Positives = 47/94 (50%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKDK 608
+D +G +I +GD+LRAL NPT A I F+PI+ K++
Sbjct: 14 FDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFED-FVPIFQSVSKNR 72
Query: 607 DQGAYEDFLECLKLYDKNENGLMLGAELTHASCT 506
++ E+F+E L +DK NG++ AEL H T
Sbjct: 73 EKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTT 106
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 48.0 bits (109), Expect = 8e-06
Identities = 28/94 (29%), Positives = 45/94 (47%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKDK 608
+D +G GKIDA + ++LR+L+ NP + + FLP+ S + +K
Sbjct: 17 FDKKGDGKIDAAQVFEVLRSLDENPKNSDVHQCLAKFDKTARISFEN-FLPVLSHVRNNK 75
Query: 607 DQGAYEDFLECLKLYDKNENGLMLGAELTHASCT 506
+ EDF++ L +DK G + AEL T
Sbjct: 76 IPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTT 109
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -1
Query: 793 SXYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXE-FLPIYSQAK 617
S +D +G G I LG ++R+L NPT A + FL + A+
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--MAR 75
Query: 616 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
K KD + E+ E +++DK+ NG + AEL H
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 108
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -1
Query: 793 SXYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXE-FLPIYSQAK 617
S +D +G G I LG ++R+L NPT A + FL + A+
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--MAR 75
Query: 616 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
K KD + E+ E +++DK+ NG + AEL H
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 108
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.23
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKDK 608
+D G GKID+ L LRA+ NPT A + EF+PIY + +
Sbjct: 17 HDTLGDGKIDSKQLPTALRAMMLNPTEA-LLAEVSKARTSGARITVEEFIPIYKKVEAAC 75
Query: 607 DQG-AYEDFLECLKLYDKNENGLMLGAEL 524
+ ++F L +D+ NG ++ EL
Sbjct: 76 GRSTTLKEFQTLLSHFDREGNGQIMLMEL 104
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPT--LATIXXXXXXXXXXXXXXXXXEFLPIYSQAKK 614
YD E GKID +GD+ RA PT + T E+LP+Y Q K
Sbjct: 16 YDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAK 75
Query: 613 DK 608
+K
Sbjct: 76 EK 77
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 622 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
A+K K + E+ E +++DK+ NG + AEL H
Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRH 57
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXXXXXXXXEFLPIYSQAKKD 611
+D +G G I LG +R+L NPT I EF + + K+
Sbjct: 90 FDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKE 149
Query: 610 KDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
D E E +++DK+ NG++ E +
Sbjct: 150 TDS---EMIREAFRVFDKDGNGVITAQEFRY 177
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 427 PLRSIPEEGHGVEDITTRHIFSYKIVTFLRRMCDGWDPKRPKPGT 293
P R +P G + TT + S + T R G+ P+RP+PGT
Sbjct: 313 PSRPVPPTSDGHIEATTPYNPSAQYPTGKRGSHPGFGPQRPRPGT 357
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXXXXXXXXEFLPIYSQAKKD 611
+D +G G I LG +R+L NPT I EF + + K+
Sbjct: 33 FDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKE 92
Query: 610 KDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
D E E +++DK+ NG++ E +
Sbjct: 93 TDS---EMIREAFRVFDKDGNGVITAQEFRY 120
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKD 611
+D +G G I + LG +R+L NPT + EF + + K+
Sbjct: 44 FDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKE 103
Query: 610 KDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
D E E +++D++ NG + E +
Sbjct: 104 NDS---EMIREAFRVFDRDGNGFITADEFRY 131
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSN 716
YD EG G I+ +L D+LRAL+ N
Sbjct: 104 YDKEGNGYINVSDLRDILRALDDN 127
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -2
Query: 777 KAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRE 598
K ++ P+ L +R TP PSRNS +Q+ A K+ + +++ + T+
Sbjct: 319 KQPSQKKPADLTPHPKRPPITPETLPSRNSEIQKPAASKIQEKKTEVIARSQKSEASTKI 378
Query: 597 RMKIS 583
K S
Sbjct: 379 AQKPS 383
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKD 611
+D +G G I LG +RAL NPT + EF + + K+
Sbjct: 38 FDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGNGQVEFPEFCVMMKRIMKE 97
Query: 610 KDQGAYEDFLECLKLYDKNENGLMLGAE 527
D E E K++D++ NG++ E
Sbjct: 98 TDS---EMIREAFKIFDRDGNGVITANE 122
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKD 611
+D +G G I + LG +R+L NPT + EF + + K+
Sbjct: 44 FDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKE 103
Query: 610 KDQGAYEDFLECLKLYDKNENGLMLGAELTH 518
D E E +++D++ NG + E +
Sbjct: 104 NDS---EMIREAFRVFDRDGNGFITADEFRY 131
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSN 716
YD EG G I+ +L D+LRAL+ N
Sbjct: 104 YDKEGNGYINVSDLRDILRALDDN 127
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = -1
Query: 787 YDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKD 611
+D +G ++ LG+ +R L NPT + EF + + K+
Sbjct: 32 FDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKMMKEMNKE 91
Query: 610 KDQGAYEDFLECLKLYDKNENGLMLGAELTHASCT 506
DQ E K++DK+ NG + E H T
Sbjct: 92 TDQ---ELIRLAFKVFDKDGNGYITAQEFKHFMTT 123
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 235 LRAPPEELSPPRALPAPVPQSRASV 309
LRAP EE PP A APVP ++
Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,458,285
Number of Sequences: 27780
Number of extensions: 288125
Number of successful extensions: 995
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -