Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_M03
(332 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81531-6|CAB04317.2| 330|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 1.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 1.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 1.1
U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 27 2.5
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 27 2.5
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 27 2.5
AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical... 27 2.5
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 27 4.3
U80955-7|AAG01555.1| 116|Caenorhabditis elegans Hypothetical pr... 27 4.3
AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical ... 27 4.3
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 26 5.7
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 26 5.7
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 26 5.7
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 5.7
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 26 5.7
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 26 5.7
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 26 5.7
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 26 5.7
Z49132-6|CAA88985.1| 406|Caenorhabditis elegans Hypothetical pr... 26 7.5
AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4 ... 26 7.5
AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin pro... 26 7.5
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 25 10.0
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 25 10.0
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 25 10.0
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 25 10.0
AF022978-3|AAG24182.2| 403|Caenorhabditis elegans Hypothetical ... 25 10.0
>Z81531-6|CAB04317.2| 330|Caenorhabditis elegans Hypothetical
protein F36D3.6 protein.
Length = 330
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 205 PYVVPLPYAATAGYPLSYVSSLSVPTV 125
P+V+ YAA AGYPL + L VPT+
Sbjct: 72 PFVI---YAAVAGYPLGVIVYLGVPTI 95
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 221 LRGGRPVC--GASAVRCNCRLPPFLRFILISTYRLQLCVHRLL 99
+R G+ C GA+ RC+ LP +LR R CVH L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 221 LRGGRPVC--GASAVRCNCRLPPFLRFILISTYRLQLCVHRLL 99
+R G+ C GA+ RC+ LP +LR R CVH L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 221 LRGGRPVC--GASAVRCNCRLPPFLRFILISTYRLQLCVHRLL 99
+R G+ C GA+ RC+ LP +LR R CVH L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 221 LRGGRPVC--GASAVRCNCRLPPFLRFILISTYRLQLCVHRLL 99
+R G+ C GA+ RC+ LP +LR R CVH L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140
>U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical
protein F28H1.1 protein.
Length = 221
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 165 TPFPTFHPYQYLPSTALRSPASTHKSHTQ 79
TP PTF PY S +L SP ++ S+ +
Sbjct: 156 TPLPTFQPYPSTRSYSLESPTTSVTSNEE 184
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 226 FACAAADPYVVPLPYAATAGYPLSYVSSLSVPT--VYSSAFTGFYPQIAYANDYXFRK*N 53
+AC A +P+V+ PL Y+ +L +PT + A TGF+ A +D K N
Sbjct: 246 YACCA-EPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTP-ASTDDDRTEKIN 303
Query: 52 VKVNTYI 32
+ + T +
Sbjct: 304 LGITTLL 310
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 226 FACAAADPYVVPLPYAATAGYPLSYVSSLSVPT--VYSSAFTGFYPQIAYANDYXFRK*N 53
+AC A +P+V+ PL Y+ +L +PT + A TGF+ A +D K N
Sbjct: 246 YACCA-EPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTP-ASTDDDRTEKIN 303
Query: 52 VKVNTYI 32
+ + T +
Sbjct: 304 LGITTLL 310
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 226 FACAAADPYVVPLPYAATAGYPLSYVSSLSVPT--VYSSAFTGFYPQIAYANDYXFRK*N 53
+AC A +P+V+ PL Y+ +L +PT + A TGF+ A +D K N
Sbjct: 246 YACCA-EPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTP-ASTDDDRTEKIN 303
Query: 52 VKVNTYI 32
+ + T +
Sbjct: 304 LGITTLL 310
>AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical
protein Y105C5A.24 protein.
Length = 478
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Frame = -3
Query: 315 PMSANRVQSNLASDKV--SKCLRRF*SQCWLSSPARRPTRMWCL----CRTLQLPATPFP 154
P N NL ++ + L F +CW +PA RPT C+ C + P P
Sbjct: 249 PFLYNVATRNLRPHEIECNPILSNFYKRCWSDNPASRPTSADCVEYFRCLRSEYPNGNVP 308
Query: 153 TFHP 142
+ P
Sbjct: 309 LWDP 312
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 186 RTLQLPATPFPTFHPYQYLPSTALRSP 106
R +QLP TP T P + P +R+P
Sbjct: 654 RNVQLPFTPADTHKPIKVAPKEPVRNP 680
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 186 RTLQLPATPFPTFHPYQYLPSTALRSP 106
R +QLP TP T P + P +R+P
Sbjct: 658 RNVQLPFTPADTHKPIKVAPKEPVRNP 684
>U80955-7|AAG01555.1| 116|Caenorhabditis elegans Hypothetical
protein T04C9.2 protein.
Length = 116
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 191 SAVRCNCRLPPFLRFILIST 132
+A RC CR PPFL + ST
Sbjct: 35 AASRCRCRRPPFLSIRIGST 54
>AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical
protein Y6E2A.6 protein.
Length = 357
Score = 26.6 bits (56), Expect = 4.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = -2
Query: 262 MFKAFLITMLALFACAAADPY--VVPLPY---AATAGYPLSYVSSLSVPT 128
M K + +L C D Y ++ +PY +A AGYPL + L +PT
Sbjct: 45 MEKVKISILLMHLTCFWLDIYFNILSIPYMIHSAAAGYPLGILFHLGLPT 94
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 469 PAELAQRSHSLCIGPMTPSTPFPTSQP 495
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 760 PAELAQRSHSLCIGPMTPSTPFPTSQP 786
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQP 801
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQP 801
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 469 PAELAQRSHSLCIGPMTPSTPFPTSQP 495
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 760 PAELAQRSHSLCIGPMTPSTPFPTSQP 786
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQP 801
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 222 PARRPTRMWCLCRTLQLPATPFPTFHP 142
PA R LC P+TPFPT P
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQP 801
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 321 GRPMSANRVQSNLASDKVSKCLRRF*SQCWLSSPARRPTRMWCLCR-TLQLP 169
G+ + R+ + L K+ L +CW S P +RP+ + R T+Q+P
Sbjct: 442 GQKAALQRLDAQL--QKIDGKLHELLLECWSSQPEKRPSFQQIVKRITVQMP 491
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 321 GRPMSANRVQSNLASDKVSKCLRRF*SQCWLSSPARRPTRMWCLCR-TLQLP 169
G+ + R+ + L K+ L +CW S P +RP+ + R T+Q+P
Sbjct: 482 GQKAALQRLDAQL--QKIDGKLHELLLECWSSQPEKRPSFQQIVKRITVQMP 531
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 321 GRPMSANRVQSNLASDKVSKCLRRF*SQCWLSSPARRPTRMWCLCR-TLQLP 169
G+ + R+ + L K+ L +CW S P +RP+ + R T+Q+P
Sbjct: 442 GQKAALQRLDAQL--QKIDGKLHELLLECWSSQPEKRPSFQQIVKRITVQMP 491
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 321 GRPMSANRVQSNLASDKVSKCLRRF*SQCWLSSPARRPTRMWCLCR-TLQLP 169
G+ + R+ + L K+ L +CW S P +RP+ + R T+Q+P
Sbjct: 482 GQKAALQRLDAQL--QKIDGKLHELLLECWSSQPEKRPSFQQIVKRITVQMP 531
>Z49132-6|CAA88985.1| 406|Caenorhabditis elegans Hypothetical
protein ZK666.6 protein.
Length = 406
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 250 FLITMLALFACAAADPYVVPLP 185
FLI ++ ++AC+A D P P
Sbjct: 5 FLIVLIGVYACSAQDSSTTPSP 26
>AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4
protein.
Length = 348
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 268 IKMFKAFLITMLALFACAAADPYVV 194
+K F FLIT L AAAD ++V
Sbjct: 1 MKQFFEFLITTFLLLGLAAADEHIV 25
>AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin
protein 4 protein.
Length = 348
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 268 IKMFKAFLITMLALFACAAADPYVV 194
+K F FLIT L AAAD ++V
Sbjct: 1 MKQFFEFLITTFLLLGLAAADEHIV 25
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 229 LFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTG-FYP 95
L+ A+ PY +P T YP S + + V ++ F G +YP
Sbjct: 3753 LYEVASVQPYAMPPD--CTRNYPASQIDIVHPYDVLTATFNGSYYP 3796
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 229 LFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTG-FYP 95
L+ A+ PY +P T YP S + + V ++ F G +YP
Sbjct: 3764 LYEVASVQPYAMPPD--CTRNYPASQIDIVHPYDVLTATFNGSYYP 3807
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 229 LFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTG-FYP 95
L+ A+ PY +P T YP S + + V ++ F G +YP
Sbjct: 3764 LYEVASVQPYAMPPD--CTRNYPASQIDIVHPYDVLTATFNGSYYP 3807
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 229 LFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTG-FYP 95
L+ A+ PY +P T YP S + + V ++ F G +YP
Sbjct: 3764 LYEVASVQPYAMPPD--CTRNYPASQIDIVHPYDVLTATFNGSYYP 3807
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 309 SANR-VQSNLASDKVSKCLRRF*SQCWLSSPARRPTRMWCL 190
+ NR Q D++ K ++ CW +SP +RPT C+
Sbjct: 237 NGNRNAQPKYCPDEIYKLMK----MCWKTSPKKRPTFKECV 273
>AF022978-3|AAG24182.2| 403|Caenorhabditis elegans Hypothetical
protein T01G6.6 protein.
Length = 403
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 146 ILISTYRLQLCVHRLLPTNRIRK 78
IL+ST+ L+ +HRL T ++RK
Sbjct: 220 ILMSTWHLRARLHRLSQTAKLRK 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,685,967
Number of Sequences: 27780
Number of extensions: 151553
Number of successful extensions: 540
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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