Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_M02
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0599 + 19156896-19156960,19157201-19157329,19158536-19158653     28   7.6  
08_01_0359 + 3152483-3152857,3154493-3154855,3155133-3155211,315...    28   7.6  

>08_02_0599 + 19156896-19156960,19157201-19157329,19158536-19158653
          Length = 103

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 100 IDKERSGSXVI*IHVDSGDRMEKNCKFF 17
           ID+++SG  V+ IH   G    + CK++
Sbjct: 63  IDRQQSGEAVVEIHPQHGTGQPRGCKYY 90


>08_01_0359 +
           3152483-3152857,3154493-3154855,3155133-3155211,
           3155473-3155879,3156342-3156497,3156728-3156895,
           3156991-3157131,3157739-3157966,3158063-3158176,
           3158293-3158448
          Length = 728

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 445 SPPQPAPSRGGAASLAETAFHKSTSSG 525
           +PP P P  GGAA       HK T+ G
Sbjct: 33  APPTPEPEAGGAAVAVAGVLHKWTNYG 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,603,528
Number of Sequences: 37544
Number of extensions: 320347
Number of successful extensions: 824
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)