Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_M02
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    27   0.90 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.8  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   8.4  

>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = +2

Query: 170 NQTSIPRPTSLLTYQXAITINHNNSGQT 253
           N T++  P+++  +Q +  IN+N++G+T
Sbjct: 31  NHTTVVAPSAVSPHQSSFMINNNSTGRT 58


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 383 GSVACVDSXT*G*YLLRPADAP 318
           GS A  +  T G Y+L+P++AP
Sbjct: 773 GSTASAECVTNGDYMLQPSNAP 794


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 503 NAVSASDAAPPREGAGCGGETXIDRT*RNKL 411
           N  SA+   PP  G G  G    D T +N+L
Sbjct: 80  NGRSAAGNLPPATGTGTAGSRGGDGTFQNQL 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,417
Number of Sequences: 2352
Number of extensions: 12143
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)