Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L24
(422 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 1.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 1.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 1.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 1.9
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 2.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 2.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 3.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 3.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 7.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 7.5
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 20 10.0
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 266 YDNSNYFNLLYA*CEFFNV--LDSVKVK-PXKYAVGTAPP 376
Y+N+NY N Y +++N+ ++ + + P G PP
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 266 YDNSNYFNLLYA*CEFFNV--LDSVKVK-PXKYAVGTAPP 376
Y+N+NY N Y +++N+ ++ + + P G PP
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 266 YDNSNYFNLLYA*CEFFNV--LDSVKVK-PXKYAVGTAPP 376
Y+N+NY N Y +++N+ ++ + + P G PP
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 266 YDNSNYFNLLYA*CEFFNV--LDSVKVK-PXKYAVGTAPP 376
Y+N+NY N Y +++N+ ++ + + P G PP
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 2.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 68 FSLIYGLLLTYRNKLNEV 15
FS +YG LLT N++ +
Sbjct: 591 FSAVYGALLTKTNRIARI 608
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 2.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 68 FSLIYGLLLTYRNKLNEV 15
FS +YG LLT N++ +
Sbjct: 681 FSAVYGALLTKTNRIARI 698
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.3
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 251 SWKRLYDNSNYFNLLYA*CEFFNVLDSVKVK---PXKYAVGTAPP 376
++K Y+N+NY N Y ++N+++ ++ P G PP
Sbjct: 93 NYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPP 137
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.3
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 251 SWKRLYDNSNYFNLLYA*CEFFNVLDSVKVK---PXKYAVGTAPP 376
++K Y+N+NY N Y ++N+++ ++ P G PP
Sbjct: 93 NYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPP 137
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 273 TAIISIYCMLSASFLTFSIASKLSXINM 356
T +IS+Y +S +TF+ A + +N+
Sbjct: 272 TPLISLYYGVSICLVTFASALAVVTLNL 299
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 20.6 bits (41), Expect = 7.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 293 LYA*CEFFNVLDSVK 337
+YA CEF N SVK
Sbjct: 64 IYAKCEFLNPGGSVK 78
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 123 YKNIKGYILTGKMNRAINI 179
Y N+K +++G INI
Sbjct: 224 YNNLKAMVVSGSKGSNINI 242
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,595
Number of Sequences: 438
Number of extensions: 2107
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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