Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L21
(353 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1232 + 25429955-25430392,25430885-25431388,25432657-254328... 29 1.4
07_01_0446 - 3371829-3372132,3374691-3375673 29 1.4
03_05_0613 + 26124714-26124857,26125692-26126330,26126455-261266... 28 1.8
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 27 3.2
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 27 4.2
05_06_0110 + 25632514-25632834,25633200-25634039 27 4.2
01_01_0650 - 4948852-4950012 27 4.2
11_06_0138 + 20522197-20522670 27 5.6
11_02_0141 + 8744928-8746187 27 5.6
04_04_1677 + 35306232-35306328,35306697-35307248,35307324-353076... 27 5.6
12_01_0911 + 8868557-8868664,8869415-8869420,8869774-8869928,887... 26 7.4
09_02_0369 - 8012470-8013120 26 7.4
08_02_0117 + 12767502-12767588,12768846-12768908,12769299-12770741 26 7.4
03_02_0984 + 12947444-12947530,12949071-12949127,12949833-129499... 26 7.4
01_06_0683 - 31173763-31174635,31175146-31175436 26 7.4
11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656... 26 9.8
08_02_0078 + 12001523-12001634,12002169-12002500,12002624-120027... 26 9.8
04_04_0797 - 28137656-28137836,28138082-28138207,28138364-28138422 26 9.8
02_02_0338 + 9105725-9106581,9106950-9107091 26 9.8
01_06_1352 + 36521362-36521565,36521659-36522009,36522102-365223... 26 9.8
>08_02_1232 +
25429955-25430392,25430885-25431388,25432657-25432803,
25432999-25433106,25433242-25433331
Length = 428
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 254 QIVLFKMPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMASGGLFGG 120
Q V FK G + + CF+ + + +I CV A GG+F G
Sbjct: 173 QEVNFKYKGQGPQVYRKFLRCFEDLPLATIIAGCVYTAHGGIFRG 217
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 158 FCVGMASGGLFGGFTALRYGARGKELVHSVGKVML 54
F G ++GG F A+R+GA G + V G V+L
Sbjct: 164 FVSGESAGGNFAHHLAVRFGAAGLDPVRVAGYVLL 198
>03_05_0613 +
26124714-26124857,26125692-26126330,26126455-26126695,
26126913-26127496
Length = 535
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 183 NENGFYDWFL--CRDG*WRSFRRIYCIKVWSKGERVSTFRWKSNAXKVEAH 37
++N + D++L + G + +F R C+KVW E +W+ K H
Sbjct: 344 SDNRYSDFYLGKSKKGVYLAFCRDQCLKVWILDETFGEMKWELKHDKDMRH 394
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 67 PTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 162
PT ++ P +P NA PP PP P + P
Sbjct: 82 PTPAASTPPASPTANASPPPSLPPPPPPLRPP 113
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 64 FPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKP 162
F EC P P A+ PP +PP+ +P Q P
Sbjct: 242 FEQECQRLEPPMPL--ALPPPPQPPVPMPMQAP 272
>05_06_0110 + 25632514-25632834,25633200-25634039
Length = 386
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = +1
Query: 28 KSQMCLHLXSITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
+ + CLH + P T NA + +P +P P F++SKH
Sbjct: 251 EGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKH 306
>01_01_0650 - 4948852-4950012
Length = 386
Score = 27.1 bits (57), Expect = 4.2
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +1
Query: 97 APYLNAVNPPKRPPLAIPTQKPIIKPIFILSKHEGPWL**TAPGTGILNKTICKLFLSFS 276
+P ++PPK P P++ P + P + G W PG G + + SF
Sbjct: 221 SPTSTLMSPPKSP----PSESPPLSPDGAAAIRRGSW-----PGVG---SPVNDVLASFR 268
Query: 277 YTKYNKITSKP 309
+ NK+ S P
Sbjct: 269 QLRLNKVKSSP 279
>11_06_0138 + 20522197-20522670
Length = 157
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 121 PPKRPPLAIPTQ-KPIIKPIFILSKHEGP--WL**TAPGTGIL 240
PP+RPPL +P+ P++ ++ ++ P W PG IL
Sbjct: 22 PPRRPPLPLPSDVTPVLDGYYVTARWLAPPRWPPTPPPGDVIL 64
>11_02_0141 + 8744928-8746187
Length = 419
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 121 PPKRPPLAIPTQKPIIKPIF 180
PPK P L IP + P +KP F
Sbjct: 186 PPKNPFLGIPKEFPGVKPEF 205
>04_04_1677 +
35306232-35306328,35306697-35307248,35307324-35307608,
35308035-35308296,35308378-35308430,35308520-35308587,
35310331-35310420,35310502-35310586,35310822-35311254,
35312872-35313439,35313527-35314000
Length = 988
Score = 26.6 bits (56), Expect = 5.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 121 PPKRPPLAIPTQKPIIKPIFILSKHEGPWL**TAPGTGI 237
P P + P P K +L KH P+ PG GI
Sbjct: 225 PASSPNVTTPVDAPAPKTKTVLQKHHQPYRITVIPGIGI 263
>12_01_0911 +
8868557-8868664,8869415-8869420,8869774-8869928,
8870145-8871031,8871079-8871123,8872528-8872572,
8873025-8873513,8873603-8873733
Length = 621
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 97 APYLNAVNPPKRPPLAIPT 153
AP N VNP +R +A+PT
Sbjct: 547 APLFNLVNPQERNTIAVPT 565
>09_02_0369 - 8012470-8013120
Length = 216
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKHEGP 204
P AP+ A PP PP P KP + FI ++ P
Sbjct: 29 PPAPHAAATKPPPPPPHDDPPLKPPPQQQFITAQPPPP 66
>08_02_0117 + 12767502-12767588,12768846-12768908,12769299-12770741
Length = 530
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 106 LNAVNPPKRPPLAIPTQKPIIKPIFILSKHEGP 204
L + PP RPPL + P ++ F+ + E P
Sbjct: 450 LPIMEPPPRPPLELKPLPPSLRYAFLHNGREAP 482
>03_02_0984 +
12947444-12947530,12949071-12949127,12949833-12949904,
12950050-12950112,12950955-12951131,12951503-12951628,
12951711-12951777,12952019-12952215,12952617-12952691,
12954524-12954554,12954714-12954802,12955120-12955188,
12955306-12955425,12955963-12956081,12956303-12956441,
12956538-12957038,12957293-12957592,12957694-12957875,
12958277-12958388,12958953-12959072
Length = 900
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 162 WFLCRDG*WRSFRRIYCIKVWS 97
W LC G +SF R Y ++WS
Sbjct: 843 WCLCTLGYLKSFSRQYATEIWS 864
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = +1
Query: 28 KSQMCLHLXSITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
+ + CLH + P T NA + +P +P P F++SKH
Sbjct: 260 EGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKH 315
>11_04_0051 +
12863978-12864476,12864575-12864674,12865567-12865657,
12866114-12866176,12866364-12866549,12866994-12867024,
12867054-12867502
Length = 472
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 152 VGMASGGLFGGFTALRYGARGKELVHSVGKVM 57
V A GG FGG A G G E+ SVG ++
Sbjct: 289 VEAACGGGFGGEVAAHGGGFGGEVAMSVGNLV 320
>08_02_0078 +
12001523-12001634,12002169-12002500,12002624-12002791,
12002904-12003311
Length = 339
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 106 LNAVNPPKRPPLAIPTQKPIIKPIFILSKHEGP 204
L + PP RPPL + P ++ F+ + E P
Sbjct: 249 LPIMEPPPRPPLELKLLPPGLRYAFLYNDGEAP 281
>04_04_0797 - 28137656-28137836,28138082-28138207,28138364-28138422
Length = 121
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 76 CTNSFPLAPYLNAVNPPKR 132
C + +PL P LN VN PK+
Sbjct: 56 CQSKWPLFPRLNKVNRPKQ 74
>02_02_0338 + 9105725-9106581,9106950-9107091
Length = 332
Score = 25.8 bits (54), Expect = 9.8
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 67 PTECTNSFPL-APYLNAVNPP--KRPPLAIPTQKPIIKP 174
P T + P AP PP K PPLA PTQ +KP
Sbjct: 14 PKPATAAQPAPAPATARTTPPLKKPPPLAPPTQARPLKP 52
>01_06_1352 +
36521362-36521565,36521659-36522009,36522102-36522393,
36522491-36522598,36522685-36522821
Length = 363
Score = 25.8 bits (54), Expect = 9.8
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Frame = +3
Query: 24 IKVPNVPPPXKHYFSNGMY*LFPPCSIP*CSKSAEKTSTSHPYTKTNHK--------THF 179
+++ ++P P K + G PP P A+KT+ + + N+ HF
Sbjct: 127 LRMNSIPVPQKPHAHAGHGRFVPPARNPSPPVQAQKTAGAFQFAPNNNMLTQRQVQVAHF 186
Query: 180 HFIKTRRSL 206
H +K R+ L
Sbjct: 187 HLLKQRQLL 195
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,866,025
Number of Sequences: 37544
Number of extensions: 210304
Number of successful extensions: 683
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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