Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L21
(353 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105281-1|AAI05282.1| 79|Homo sapiens chromosome 20 open read... 76 4e-14
BC008488-1|AAH08488.1| 79|Homo sapiens C20orf52 protein protein. 76 4e-14
AL357374-6|CAC11117.1| 79|Homo sapiens chromosome 20 open read... 76 4e-14
AL357374-5|CAI13604.1| 59|Homo sapiens chromosome 20 open read... 55 5e-08
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 25 2.9
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 25 2.9
EF488667-1|ABP02055.1| 95|Homo sapiens TFPI2 variant protein. 29 3.1
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t... 29 3.1
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t... 29 3.1
AK074121-1|BAB84947.1| 491|Homo sapiens FLJ00193 protein protein. 29 3.1
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 25 3.9
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 25 3.9
BC090870-1|AAH90870.1| 449|Homo sapiens SLC22A17 protein protein. 29 5.4
BC048988-1|AAH48988.1| 412|Homo sapiens C13orf3 protein protein. 29 5.4
BC020565-1|AAH20565.1| 538|Homo sapiens solute carrier family 2... 29 5.4
BC013418-1|AAH13418.1| 330|Homo sapiens C13orf3 protein protein. 29 5.4
AL158032-4|CAM13059.1| 412|Homo sapiens chromosome 13 open read... 29 5.4
AL158032-3|CAM13060.1| 388|Homo sapiens chromosome 13 open read... 29 5.4
AL158032-2|CAH69950.1| 330|Homo sapiens chromosome 13 open read... 29 5.4
AK090584-1|BAC03484.1| 388|Homo sapiens protein ( Homo sapiens ... 29 5.4
AF361358-1|AAO13796.1| 412|Homo sapiens RAMA1 protein. 29 5.4
AK022233-1|BAB13992.1| 309|Homo sapiens protein ( Homo sapiens ... 28 9.5
>BC105281-1|AAI05282.1| 79|Homo sapiens chromosome 20 open reading
frame 52 protein.
Length = 79
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = -1
Query: 236 MPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVGKVM 57
MPV Y PSCFD++KMGF++G VGMA+G LFG F+ LR G RG+EL+ +GK M
Sbjct: 1 MPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTM 60
Query: 56 L 54
+
Sbjct: 61 M 61
>BC008488-1|AAH08488.1| 79|Homo sapiens C20orf52 protein protein.
Length = 79
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = -1
Query: 236 MPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVGKVM 57
MPV Y PSCFD++KMGF++G VGMA+G LFG F+ LR G RG+EL+ +GK M
Sbjct: 1 MPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTM 60
Query: 56 L 54
+
Sbjct: 61 M 61
>AL357374-6|CAC11117.1| 79|Homo sapiens chromosome 20 open reading
frame 52 protein.
Length = 79
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = -1
Query: 236 MPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVGKVM 57
MPV Y PSCFD++KMGF++G VGMA+G LFG F+ LR G RG+EL+ +GK M
Sbjct: 1 MPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTM 60
Query: 56 L 54
+
Sbjct: 61 M 61
>AL357374-5|CAI13604.1| 59|Homo sapiens chromosome 20 open reading
frame 52 protein.
Length = 59
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -1
Query: 236 MPVPGAVYHNQGPSCFDKMKMGFMIGFCVGMASGGLFGGFTAL 108
MPV Y PSCFD++KMGF++G VGMA+G LFG F+ L
Sbjct: 1 MPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCL 43
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +1
Query: 100 PYLNA--VNPPKRPPLAIPTQKPI 165
P+L A V PPK PL T+KP+
Sbjct: 934 PFLGAATVEPPKPIPLTWKTEKPV 957
Score = 23.0 bits (47), Expect(2) = 2.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 148 PTQKPIIKPIFILSKHEGPW 207
P+ P P+F++ K G W
Sbjct: 987 PSFSPWNSPVFVIQKKSGKW 1006
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +1
Query: 100 PYLNAVN--PPKRPPLAIPTQKPI 165
P+L AV PPK PL T+KP+
Sbjct: 934 PFLGAVTVEPPKPIPLTWKTEKPV 957
Score = 23.0 bits (47), Expect(2) = 2.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 148 PTQKPIIKPIFILSKHEGPW 207
P+ P P+F++ K G W
Sbjct: 987 PSFSPWNSPVFVIQKKSGKW 1006
>EF488667-1|ABP02055.1| 95|Homo sapiens TFPI2 variant protein.
Length = 95
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 183 NENGFYDWFLCRDG*WR--SFRRIYCIKVWSKGERVSTFRWKSNAXKV 46
N N FY W C D WR ++ K K +++ R+ S K+
Sbjct: 43 NANNFYTWEACDDACWRIEKVPKVESAKALKKKKKMPKLRFASRIRKI 90
>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 30 VPNVPPPXKHYFSNGMY*LFPPCS 101
+P+VPP HY+SN Y CS
Sbjct: 806 MPDVPPSYSHYYSNPSYHTLSQCS 829
>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 30 VPNVPPPXKHYFSNGMY*LFPPCS 101
+P+VPP HY+SN Y CS
Sbjct: 806 MPDVPPSYSHYYSNPSYHTLSQCS 829
>AK074121-1|BAB84947.1| 491|Homo sapiens FLJ00193 protein protein.
Length = 491
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 30 VPNVPPPXKHYFSNGMY*LFPPCS 101
+P+VPP HY+SN Y CS
Sbjct: 260 MPDVPPSYSHYYSNPSYHTLSQCS 283
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1177
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +1
Query: 100 PYLNA--VNPPKRPPLAIPTQKPI 165
P+L A + PPK PL T+KP+
Sbjct: 934 PFLGAATIEPPKPIPLTWKTEKPV 957
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 148 PTQKPIIKPIFILSKHEGPW 207
P+ P P+F++ K G W
Sbjct: 987 PSFSPWNSPVFVIQKKSGKW 1006
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1117
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +1
Query: 100 PYLNA--VNPPKRPPLAIPTQKPI 165
P+L A + PPK PL T+KP+
Sbjct: 934 PFLGAATIEPPKPIPLTWKTEKPV 957
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 148 PTQKPIIKPIFILSKHEGPW 207
P+ P P+F++ K G W
Sbjct: 987 PSFSPWNSPVFVIQKKSGKW 1006
>BC090870-1|AAH90870.1| 449|Homo sapiens SLC22A17 protein protein.
Length = 449
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 158 FCVGMASGGLFGGFTALRYGARG 90
F +G ASG LF G+ A R+G RG
Sbjct: 36 FILGFASGYLFLGYPADRFGRRG 58
>BC048988-1|AAH48988.1| 412|Homo sapiens C13orf3 protein protein.
Length = 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 90 PPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTRRSLVVINSTRYRH 236
P IP S ST++P +KTN ++ ++ R SLV+ + T + +
Sbjct: 292 PGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN 340
>BC020565-1|AAH20565.1| 538|Homo sapiens solute carrier family 22
(organic cation transporter), member 17 protein.
Length = 538
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 158 FCVGMASGGLFGGFTALRYGARG 90
F +G ASG LF G+ A R+G RG
Sbjct: 107 FILGFASGYLFLGYPADRFGRRG 129
>BC013418-1|AAH13418.1| 330|Homo sapiens C13orf3 protein protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 90 PPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTRRSLVVINSTRYRH 236
P IP S ST++P +KTN ++ ++ R SLV+ + T + +
Sbjct: 210 PGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN 258
>AL158032-4|CAM13059.1| 412|Homo sapiens chromosome 13 open reading
frame 3 protein.
Length = 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 90 PPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTRRSLVVINSTRYRH 236
P IP S ST++P +KTN ++ ++ R SLV+ + T + +
Sbjct: 292 PGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN 340
>AL158032-3|CAM13060.1| 388|Homo sapiens chromosome 13 open reading
frame 3 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 90 PPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTRRSLVVINSTRYRH 236
P IP S ST++P +KTN ++ ++ R SLV+ + T + +
Sbjct: 292 PGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN 340
>AL158032-2|CAH69950.1| 330|Homo sapiens chromosome 13 open reading
frame 3 protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 90 PPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTRRSLVVINSTRYRH 236
P IP S ST++P +KTN ++ ++ R SLV+ + T + +
Sbjct: 210 PGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN 258
>AK090584-1|BAC03484.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ33265 fis, clone ASTRO2006920. ).
Length = 388
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 90 PPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTRRSLVVINSTRYRH 236
P IP S ST++P +KTN ++ ++ R SLV+ + T + +
Sbjct: 292 PGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN 340
>AF361358-1|AAO13796.1| 412|Homo sapiens RAMA1 protein.
Length = 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 90 PPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHFIKTRRSLVVINSTRYRH 236
P IP S ST++P +KTN ++ ++ R SLV+ + T + +
Sbjct: 292 PGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSETCFEN 340
>AK022233-1|BAB13992.1| 309|Homo sapiens protein ( Homo sapiens
cDNA FLJ12171 fis, clone MAMMA1000670. ).
Length = 309
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 146 MASGGLFGGFTALRYGARGKELVHSVGKVMLXRWRHIWDFYGYWNWY 6
+A G+FGGF++ Y A ++ + G R ++ + +WN +
Sbjct: 246 LAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLRLYQLFHYLNHWNHF 292
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,896,158
Number of Sequences: 237096
Number of extensions: 1278167
Number of successful extensions: 6605
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6579
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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