Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L21
(353 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-6|CAB02486.3| 82|Caenorhabditis elegans Hypothetical pr... 62 8e-11
U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of ... 30 0.40
U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of ... 30 0.40
U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of ... 30 0.40
AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative pota... 30 0.40
AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative pota... 30 0.40
AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative pota... 30 0.40
CU457740-2|CAM36332.1| 301|Caenorhabditis elegans Hypothetical ... 28 1.6
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 28 2.2
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 27 2.8
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 27 2.8
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 27 2.8
AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical ... 27 2.8
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 27 2.8
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 27 3.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 5.0
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 5.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 27 5.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 5.0
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF016679-1|AAB66162.1| 539|Caenorhabditis elegans Hypothetical ... 26 6.6
Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z46381-1|CAA86513.1| 437|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical pr... 26 8.7
U39678-10|AAV28360.1| 436|Caenorhabditis elegans Hypothetical p... 26 8.7
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 26 8.7
AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like fact... 26 8.7
AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like fact... 26 8.7
AF082012-1|AAD03024.1| 437|Caenorhabditis elegans UDP-N-acetylg... 26 8.7
>Z80344-6|CAB02486.3| 82|Caenorhabditis elegans Hypothetical
protein F15D4.3 protein.
Length = 82
Score = 62.5 bits (145), Expect = 8e-11
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = -1
Query: 236 MPVP-GAVYHNQG--PSCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVG 66
MPVP G H QG PSCF K++MG M+G +G A+G L GGF R G RGK+L+ G
Sbjct: 1 MPVPSGYAAHPQGSQPSCFTKIRMGLMMGAMIGGATGILLGGFMGFRAGMRGKDLLLQTG 60
Query: 65 KVM 57
K +
Sbjct: 61 KTV 63
>U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform e protein.
Length = 544
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform c protein.
Length = 576
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform d protein.
Length = 562
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-1 protein.
Length = 562
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-3 protein.
Length = 544
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-2 protein.
Length = 576
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPIIKPIFILSKH 195
P PY + PP RPP P++ P + LS+H
Sbjct: 51 PFIPYYHYRKPPSRPPSRPPSKPPSNRNSAALSRH 85
>CU457740-2|CAM36332.1| 301|Caenorhabditis elegans Hypothetical
protein C50E10.2 protein.
Length = 301
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 117 YCIKVWSKGERVSTFRWKSN 58
YCI+ W G R F+W +N
Sbjct: 18 YCIEDWPLGHRYGVFQWATN 37
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 6 IPVPIAIKVPNVPPPXKHYFSN 71
+PVP+ I P PPP + F+N
Sbjct: 225 VPVPVVIPPPPPPPPGPNCFTN 246
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 9 PVPIAIKVPNVPPP-XKHYFSNGMY*LFPPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHF 185
P+P ++P +PPP + Y NG P CS S++ +H Y +H H+ +
Sbjct: 346 PIPQMPQMPQMPPPLHQGYGMNG-----PSCS----SENNNPFHQNHHYNDISHPNHYSY 396
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 9 PVPIAIKVPNVPPP-XKHYFSNGMY*LFPPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHF 185
P+P ++P +PPP + Y NG P CS S++ +H Y +H H+ +
Sbjct: 442 PIPQMPQMPQMPPPLHQGYGMNG-----PSCS----SENNNPFHQNHHYNDISHPNHYSY 492
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 9 PVPIAIKVPNVPPP-XKHYFSNGMY*LFPPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHF 185
P+P ++P +PPP + Y NG P CS S++ +H Y +H H+ +
Sbjct: 414 PIPQMPQMPQMPPPLHQGYGMNG-----PSCS----SENNNPFHQNHHYNDISHPNHYSY 464
>AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical
protein Y48G10A.3 protein.
Length = 343
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -1
Query: 197 SCFDKMKMGFMIGFCVGMASGGLFGGFTALRYGARGKELVHSVGKVMLXRWRHIWDFYGY 18
S D K+ IGF VG+ + L LRY A+ + V ++ V + W +GY
Sbjct: 117 SVADHFKLNQFIGFGVGVGANVL------LRYAAQNQNRVIALVLVNCCSGKSGWVEWGY 170
Query: 17 WNWYT 3
W T
Sbjct: 171 EKWNT 175
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 9 PVPIAIKVPNVPPP-XKHYFSNGMY*LFPPCSIP*CSKSAEKTSTSHPYTKTNHKTHFHF 185
P+P ++P +PPP + Y NG P CS S++ +H Y +H H+ +
Sbjct: 346 PIPQMPQMPQMPPPLHQGYGMNG-----PSCS----SENNNPFHQNHHYNDISHPNHYSY 396
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 107 RYGARGKELVHSVGKVMLXRWRHIWDFY-GYW 15
RY + + H+V + RWR WD Y YW
Sbjct: 45 RYSDKYRPQWHTVYQSTPYRWRRDWDLYDDYW 76
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 256 KLFLSF-SYTKYNKITSKPMFLPVTVNSS 339
KL + F +TK+ + +P F+PV NSS
Sbjct: 359 KLKVPFPEHTKFQQFKDEPYFIPVNANSS 387
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 256 KLFLSF-SYTKYNKITSKPMFLPVTVNSS 339
KL + F +TK+ + +P F+PV NSS
Sbjct: 331 KLKVPFPEHTKFQQFKDEPYFIPVNANSS 359
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 79 TNSFPLAPY-LNAVNPPKRPPLAIPTQKPIIKP 174
T S PL P L NPP +P P KP I+P
Sbjct: 70 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRP 102
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 79 TNSFPLAPY-LNAVNPPKRPPLAIPTQKPIIKP 174
T S PL P L NPP +P P KP I+P
Sbjct: 292 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRP 324
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 49 LXSITFPTECTNSFPLAPYLNAVNPPKRPPLAIPTQKPII 168
L + TFPT +FP P L P P +PT + I+
Sbjct: 820 LPTFTFPTLAPFTFPTLPTLATTKPSPAP--KVPTLEEIL 857
>AF016679-1|AAB66162.1| 539|Caenorhabditis elegans Hypothetical
protein T28C12.5 protein.
Length = 539
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 185 KMKMGFMIGFCVGMASGGLFGGFTALRY 102
+++ GF+ GFCV A G L F + Y
Sbjct: 19 RIQQGFLEGFCVQTAKGDLCDVFHGIPY 46
>Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical
protein F39H11.2 protein.
Length = 505
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 9 PVPIAIKVPNVPP 47
P+P+ I+VP+VPP
Sbjct: 234 PIPVKIEVPDVPP 246
>Z46381-1|CAA86513.1| 437|Caenorhabditis elegans Hypothetical
protein M01F1.1 protein.
Length = 437
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Frame = +1
Query: 58 ITFPTECTNSF---PLAPYLNAVNPPKRPP-----LAIPTQKPIIKPIFILSKH 195
IT +C N + + N+VN K PP + IPT KP + +S+H
Sbjct: 121 ITVSQDCDNESVKKEVEKFGNSVNYVKHPPGESVKIEIPTNLQKFKPYYYISRH 174
>Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical
protein C38C10.2 protein.
Length = 493
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 191 FDKMKMGFMIG-FCVGMASGGLFGGFTALRYGARGKELVHSVGKVML 54
+DK G ++ F G + GG A RYG + V +G +L
Sbjct: 78 WDKQTTGMVLSSFFYGYIGSQIIGGHLASRYGGKRVVFVTILGSALL 124
>U39678-10|AAV28360.1| 436|Caenorhabditis elegans Hypothetical
protein C39D10.11 protein.
Length = 436
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 83 LVHSVGKVMLXRWRHIWDFYGYWNW 9
L SV + + +W+ D YG++NW
Sbjct: 353 LTMSVQTLKMVKWQVFRDVYGHFNW 377
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 91 PLAPYLNAVNPPKRPPLAIPTQKPI 165
PL NA NP + PL +P+Q PI
Sbjct: 397 PLRLGPNATNPFRPAPLPVPSQLPI 421
>AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like factor
protein.
Length = 454
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 9 PVPIAIKVPNVPP 47
P+P+ I+VP+VPP
Sbjct: 234 PIPVKIEVPDVPP 246
>AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like factor
protein.
Length = 505
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 9 PVPIAIKVPNVPP 47
P+P+ I+VP+VPP
Sbjct: 234 PIPVKIEVPDVPP 246
>AF082012-1|AAD03024.1| 437|Caenorhabditis elegans
UDP-N-acetylglucosamine:a-3-D-mannosideb-1,
2-N-acetylglucosaminyltransferase I protein.
Length = 437
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Frame = +1
Query: 58 ITFPTECTNSF---PLAPYLNAVNPPKRPP-----LAIPTQKPIIKPIFILSKH 195
IT +C N + + N+VN K PP + IPT KP + +S+H
Sbjct: 121 ITVSQDCDNESVKKEVEKFGNSVNYVKHPPGESVKIEIPTNLQKFKPYYYISRH 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,584,494
Number of Sequences: 27780
Number of extensions: 187216
Number of successful extensions: 503
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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