Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L19
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0294 - 15432424-15432669,15433007-15433099,15433168-154332...    29   5.6  
11_08_0035 - 27838495-27838655,27838750-27838897,27838987-278391...    28   7.4  
11_08_0021 + 27716298-27716478,27717137-27717309,27717408-277175...    28   7.4  

>08_02_0294 -
           15432424-15432669,15433007-15433099,15433168-15433251,
           15434311-15434446,15434601-15434746,15435017-15435242,
           15435885-15435967,15436867-15437061,15437148-15437246,
           15438237-15438350,15438424-15438511,15438790-15438995,
           15439306-15439358,15440473-15440776,15441278-15441366,
           15441584-15441958,15442382-15442446,15442945-15442970,
           15444007-15444225
          Length = 948

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 243 HYYENC*EKGIFLSCQS*IGKPKNSGSLSKYLKLFQLQVSRGTETF 380
           HYY+   +KGI +   +   K  NSG L KYLKL  LQ +  T  F
Sbjct: 689 HYYDWL-KKGIHVITPN---KKANSGPLDKYLKLRTLQRASYTHYF 730


>11_08_0035 -
           27838495-27838655,27838750-27838897,27838987-27839192,
           27839291-27839972,27840074-27840247,27840963-27841181,
           27841281-27841400,27841540-27841680,27841762-27841801,
           27841969-27842129,27842506-27842589,27842659-27842721,
           27842808-27842885,27842980-27842984,27843228-27843313,
           27843354-27843544,27844089-27844166,27844255-27844365,
           27844757-27844927,27845026-27845198,27845748-27845928
          Length = 1090

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 739 GVVSGLIEHQYQPPPMLILLRTI*KK 662
           G ++ LIE+ Y PP  L+LL+ + K+
Sbjct: 554 GAITELIENGYAPPDWLVLLQVVMKR 579


>11_08_0021 +
           27716298-27716478,27717137-27717309,27717408-27717578,
           27717967-27718077,27718168-27718245,27718642-27718832,
           27718873-27718958,27719202-27719206,27719301-27719378,
           27719465-27719527,27719597-27719680,27720049-27720209,
           27720377-27720416,27720774-27720893,27720993-27721211,
           27721927-27722100,27722202-27722883,27722986-27723185,
           27723269-27723407,27723502-27723677
          Length = 1043

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 739 GVVSGLIEHQYQPPPMLILLRTI*KK 662
           G ++ LIE+ Y PP  L+LL+ + K+
Sbjct: 507 GAIAELIENGYAPPDWLVLLQVVMKR 532


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,094
Number of Sequences: 37544
Number of extensions: 242293
Number of successful extensions: 345
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)