Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L19
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical...    32   0.41 
Z67990-5|CAA91936.2|  638|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AB012617-1|BAA33488.1|  638|Caenorhabditis elegans FLR-1 protein.      30   2.2  
Z81058-11|CAH60760.1|  201|Caenorhabditis elegans Hypothetical p...    29   3.8  
U49830-6|AAK31481.1|  964|Caenorhabditis elegans Neuronal igcam ...    29   5.1  
U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    28   8.9  
AL021491-1|CAA16373.2|  319|Caenorhabditis elegans Hypothetical ...    28   8.9  
AF025452-3|AAB70939.2|  198|Caenorhabditis elegans Hypothetical ...    28   8.9  

>AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical
           protein Y75B8A.5 protein.
          Length = 401

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 441 LIISTTYLRKFKIIIWYLIIFNYF 512
           L++ TTY++KF I IW L+I  +F
Sbjct: 3   LLLGTTYVQKFNIFIWKLLILFHF 26


>Z67990-5|CAA91936.2|  638|Caenorhabditis elegans Hypothetical
           protein F02D10.5 protein.
          Length = 638

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 339 KLFQLQVSRGTETFIFGYFSSI 404
           KL +L +S+ T T+IFGYF  I
Sbjct: 103 KLEELNISKSTWTYIFGYFDEI 124


>AB012617-1|BAA33488.1|  638|Caenorhabditis elegans FLR-1 protein.
          Length = 638

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 339 KLFQLQVSRGTETFIFGYFSSI 404
           KL +L +S+ T T+IFGYF  I
Sbjct: 103 KLEELNISKSTWTYIFGYFDEI 124


>Z81058-11|CAH60760.1|  201|Caenorhabditis elegans Hypothetical
           protein F11E6.11 protein.
          Length = 201

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 142 FTYNFAAY*LHIHIYIFYTCVKCCT 216
           F  +F    L I + I+Y+C+ CCT
Sbjct: 166 FVLSFLILLLSIFVIIYYSCIACCT 190


>U49830-6|AAK31481.1|  964|Caenorhabditis elegans Neuronal igcam
           protein 6, isoform a protein.
          Length = 964

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +3

Query: 333 YLKLFQLQVSRGTETFIFGYFSSIRLFL*VTISSKQLIISTTYLRKFKIIIWYL 494
           +LK   L+V RGT+ F+  +  +I L L    +  Q+  STT +     + W L
Sbjct: 6   FLKCSHLKVKRGTQEFLVWFSFTISLALLFYPNLVQIFKSTTSIPNIPKVWWCL 59


>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 582 HYLYFQFYIYLISTTNFS 635
           +YLY +F++Y+I T  FS
Sbjct: 24  NYLYLEFFLYIIDTIQFS 41


>AL021491-1|CAA16373.2|  319|Caenorhabditis elegans Hypothetical
           protein Y44A6B.1 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 600 FYIYLISTTNFSI*LTFNLYFF 665
           F I+++ T+ FS+ L FNLY F
Sbjct: 2   FLIFVVFTSIFSVSLVFNLYLF 23


>AF025452-3|AAB70939.2|  198|Caenorhabditis elegans Hypothetical
           protein B0454.5 protein.
          Length = 198

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 139 WFTYNFAAY*LHIHIYIFYTCVKCC 213
           W+TYN A + L   I+  +  V CC
Sbjct: 167 WWTYNIATFFLFFSIFWLFMSVFCC 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,414,214
Number of Sequences: 27780
Number of extensions: 274742
Number of successful extensions: 593
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)