Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L17
         (565 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   4.9  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.5  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   6.5  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.5  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.5  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   8.6  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   8.6  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   8.6  

>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 461 KFNLVSTDKFIWKLNCPLSP 520
           K NL      IW L+C + P
Sbjct: 12  KKNLNQNQMMIWALDCSIKP 31


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 422 SSNMIKKYFTHFLKFNLVSTDKFIWKLNCPLS 517
           S++ I  YF   + FNL+ T    +KL  P++
Sbjct: 102 SADTISSYFVGKMYFNLIDTK--CYKLEHPVT 131


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 424 GTRLFSCASCDVNLTNRSELIS 359
           G++ F C  C  +  N+S L S
Sbjct: 13  GSKPFKCEKCSYSCVNKSMLNS 34


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 422 SSNMIKKYFTHFLKFNLVSTDKFIWKLNCPLS 517
           S++ I  YF   + FNL+ T    +KL  P++
Sbjct: 107 SADTISSYFVGKMYFNLIDTK--CYKLEHPVT 136


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 248 VRSWVGYMN 222
           V SW+GYMN
Sbjct: 661 VTSWLGYMN 669


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 422 SSNMIKKYFTHFLKFNLVSTDKFIWKLNCPLS 517
           S++ I  YF   + FNL+ T    +KL  P++
Sbjct: 107 SADTISSYFVGKMYFNLIDTK--CYKLEHPVT 136


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 444 YFLIILEERDYFHAHHAMSILRIV 373
           YF I     ++   HH+ SI R +
Sbjct: 107 YFHIATTSNEFIRIHHSGSITRSI 130


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 444 YFLIILEERDYFHAHHAMSILRIV 373
           YF I     ++   HH+ SI R +
Sbjct: 107 YFHIATTSNEFIRIHHSGSITRSI 130


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 444 YFLIILEERDYFHAHHAMSILRIV 373
           YF I     ++   HH+ SI R +
Sbjct: 46  YFHIATTSNEFIRIHHSGSITRSI 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,341
Number of Sequences: 438
Number of extensions: 2582
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)