Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L16
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 163 5e-39
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 145 1e-33
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 124 3e-27
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 124 3e-27
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 111 2e-23
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 110 3e-23
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 101 1e-20
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 101 3e-20
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 99 6e-20
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 90 6e-17
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 88 2e-16
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 83 9e-15
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 80 5e-14
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 78 2e-13
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 75 1e-12
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 74 3e-12
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 70 7e-11
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 69 1e-10
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 69 2e-10
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 69 2e-10
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 68 3e-10
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 61 2e-08
UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, wh... 51 4e-05
UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5; T... 49 1e-04
UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;... 46 0.001
UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast ... 45 0.002
UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000... 43 0.007
UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1; Guilla... 43 0.007
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 40 0.065
UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2; Methan... 38 0.26
UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila melanogaster|... 36 1.1
UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27; Archa... 35 1.9
UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S riboso... 34 3.3
UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 163 bits (395), Expect = 5e-39
Identities = 74/92 (80%), Positives = 81/92 (88%)
Frame = -2
Query: 419 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 240
PV KALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+P RNRMDA NI
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVNI 167
Query: 239 IKFPLTSEAAMKKIEDNNTLXFIVHTSANKHH 144
IKFPLT+EAAMKKIEDNNTL FIVHT ANK+H
Sbjct: 168 IKFPLTTEAAMKKIEDNNTLVFIVHTRANKYH 199
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 145 bits (351), Expect = 1e-33
Identities = 71/93 (76%), Positives = 75/93 (80%)
Frame = -2
Query: 485 SKLKIAXXXXXXXXXXXXXXXKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEP 306
+KLKIA KPV KALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEP
Sbjct: 129 AKLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEP 188
Query: 305 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAM 207
PR+PKYPRKSLPKRNRMDAYNIIK+PLTSEAAM
Sbjct: 189 PRNPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 221
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 124 bits (298), Expect = 3e-27
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = -2
Query: 419 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 240
PV KAL Q+KV+KG G R RKIRNSVHF RPKTF PPR+PKYPRKS+P R+RMDAYNI
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYNI 200
Query: 239 IKFPLTSEAAMK 204
IK+PLT+EAAMK
Sbjct: 201 IKYPLTTEAAMK 212
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 124 bits (298), Expect = 3e-27
Identities = 58/88 (65%), Positives = 68/88 (77%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 231
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 230 PLTSEAAMKKIEDNNTLXFIVHTSANKH 147
PLT+E+AMKKIEDNNTL FIV ANKH
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKH 107
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 111 bits (266), Expect = 2e-23
Identities = 52/88 (59%), Positives = 64/88 (72%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 231
KALKA++ V+KG H + +KI S FRRPKT + R PKYP KS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKSTPRRNKLDHYAIIKF 79
Query: 230 PLTSEAAMKKIEDNNTLXFIVHTSANKH 147
PLT+E+AMKK DNNT F+V ANKH
Sbjct: 80 PLTTESAMKKTGDNNTRVFMVDVKANKH 107
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 110 bits (265), Expect = 3e-23
Identities = 51/98 (52%), Positives = 69/98 (70%)
Frame = -2
Query: 416 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 237
V +ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK R +PKRN++DA+ II
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPKDRRFEIPKRNKLDAFRII 125
Query: 236 KFPLTSEAAMKKIEDNNTLXFIVHTSANKHHXQGCXQE 123
+ P+T+EAAMKKIEDN+TL F+V ANK + QE
Sbjct: 126 RHPVTTEAAMKKIEDNDTLVFVVDRRANKPAIKAAVQE 163
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 101 bits (243), Expect = 1e-20
Identities = 46/88 (52%), Positives = 62/88 (70%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 231
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 230 PLTSEAAMKKIEDNNTLXFIVHTSANKH 147
PLT+E+A+K+ E+NNTL F V ANKH
Sbjct: 80 PLTTESAVKRTEENNTLLFTVDVKANKH 107
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 101 bits (241), Expect = 3e-20
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = -2
Query: 419 PVTKALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 249
P +ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S RN++D
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRNKLDH 72
Query: 248 YNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANK 150
Y I+K+PLT+E+AMKKIEDNNTL FIV A+K
Sbjct: 73 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADK 105
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 99 bits (238), Expect = 6e-20
Identities = 47/99 (47%), Positives = 64/99 (64%)
Frame = -2
Query: 419 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 240
P KA A++ VVKG +GK+ K+R S FR PKT + R PKY K++P NR+D+Y +
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKV 62
Query: 239 IKFPLTSEAAMKKIEDNNTLXFIVHTSANKHHXQGCXQE 123
I+ P+TSE AMKK+ED N L F V ANK+ + +E
Sbjct: 63 IEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKE 101
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 89.8 bits (213), Expect = 6e-17
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 231
+A KA + +KG H + K+R S F RPKT R PKYPRKS+P R+D + II
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSVPHEPRLDEHKIIVH 78
Query: 230 PLTSEAAMKKIEDNNTLXFIVHTSANK 150
PL +E A+KKIE+ NTL FIV ANK
Sbjct: 79 PLNTEGALKKIEEQNTLVFIVDVKANK 105
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/87 (49%), Positives = 56/87 (64%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 231
KA A V KG K RK+R SV FRRP T P+ P YPR+S+ K +MD + I+K
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKA 92
Query: 230 PLTSEAAMKKIEDNNTLXFIVHTSANK 150
PLT+E+A +KIE +NT+ F+V ANK
Sbjct: 93 PLTTESATQKIEGSNTITFMVDMFANK 119
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = -2
Query: 323 PKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANKH 147
PKT R PK PRKS P+RN++D Y IIKFPLT+E+AMKKIED NTL FIV ANKH
Sbjct: 3 PKTLHLRRQPKCPRKSAPRRNKLDHYAIIKFPLTTESAMKKIED-NTLVFIVDVKANKH 60
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 80.2 bits (189), Expect = 5e-14
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = -2
Query: 413 TKA-LKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 237
TKA K + VK KIR V F RPKT + R+PKY RKS+ + +D Y+II
Sbjct: 18 TKANAKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSIKTQKSLDCYDII 77
Query: 236 KFPLTSEAAMKKIEDNNTLXFIVHTSANK 150
K P+T+E+AMK +E NT+ F+V+ ANK
Sbjct: 78 KRPITTESAMKMVETLNTIVFLVNERANK 106
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = -2
Query: 395 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLT 222
Q K E K+ +KI S+ F+RPKT + P++PK P+ KS K+ +D Y I+K+PLT
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILKYPLT 121
Query: 221 SEAAMKKIEDNNTLXFIVHTSANK 150
SE AMKKIE+ NTL FI A+K
Sbjct: 122 SEKAMKKIEEINTLVFICDKRADK 145
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -2
Query: 287 PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANKH 147
PRKS +RN++D Y IIKFPLT+E+AMKKIEDNNTL FIV ANKH
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKH 47
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = -2
Query: 302 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANKHHXQ 138
R PKYPRKS P+RN+ D I+KF LT+++AMK IEDNNT FIV ANKH +
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLTTKSAMKNIEDNNTFVFIVDAKANKHQIE 102
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 234
KA A R V K K+V+ RN+ HF R +T R PKY +K ++D ++I++
Sbjct: 16 KAKLASRSVKKSTSVKKVKTRRNT-HFFRGRTLSLKRTPKYEKKVKTAYTKKLDKFSIVR 74
Query: 233 FPLTSEAAMKKIEDNNTLXFIVHTSANK 150
+PLT+E+AMK IE+ NTL F+V ANK
Sbjct: 75 YPLTTESAMKMIEELNTLVFVVDPRANK 102
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = -2
Query: 362 RVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 189
+++KI S+ F+RP+T ++PK P+ KS + +D Y IIK+PLTSE AMKKIE+
Sbjct: 26 KMQKITTSIRFKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLTSEKAMKKIEEI 84
Query: 188 NTLXFIVHTSANKHHXQGCXQETX*XKC 105
NTL FI A+K + + KC
Sbjct: 85 NTLVFICDKRADKRKIKKSVKSLFDIKC 112
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 237
+ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR + K + D +++
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPIKKGSWDDPCDLL 62
Query: 236 KFPLTSEAAMKKIEDNNTLXFIVHTSANK 150
++P+ ++ +IE NNT+ FIV A+K
Sbjct: 63 RYPIKTDENTTQIEKNNTIVFIVDRRASK 91
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 68.5 bits (160), Expect = 2e-10
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNR-MDAYNIIK 234
K K VK + KIR + HF R +T P+ PK R + ++ +D ++IIK
Sbjct: 17 KQAKIAANSVKKSTTAKGYKIRRNTHFFRGRTLTLPKSPKVKRHLITAHSKKLDKFSIIK 76
Query: 233 FPLTSEAAMKKIEDNNTLXFIVHTSANKHHXQGCXQETX*XKC 105
+PLT+E +MK IE+ NTL FIV + ANK E KC
Sbjct: 77 YPLTTEKSMKMIEEINTLVFIVDSRANKEKIAKAVSELYDVKC 119
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = -2
Query: 356 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLX 177
RK FRRP T+ P K +N+ DA+ II++PLT++ AMKKIE+NNTL
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIEENNTLT 105
Query: 176 FIVHTSANK 150
FIV + ANK
Sbjct: 106 FIVDSRANK 114
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = -2
Query: 407 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 255
ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+PKR R+
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSIPKRPRL 93
>UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=7; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_85, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 150
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = -2
Query: 413 TKALKAQRKVVKGEHGKRVRKIR----NSVHFRRPKTF-EPPRHPKYPRKSLPKRNRMDA 249
T KAQ+ K+V + R N H +P PR + R+ P +D
Sbjct: 8 TTTQKAQKAAKNARVAKKVIRARTHFQNRFHTAKPLALARKPRFTRLTRQLKPITKGLDF 67
Query: 248 YNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANK 150
N++K PL +E MKK+ED NT+ F V+ A K
Sbjct: 68 QNVLKHPLITEKDMKKMEDENTMVFYVNQKATK 100
>UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L23,
putative - Trichomonas vaginalis G3
Length = 140
Score = 48.8 bits (111), Expect = 1e-04
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 410 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSL-PKRNRMDAYNIIK 234
KA A + + +G+ K V K RN F + PR P + K++ P + + Y II+
Sbjct: 4 KAQAAAQTLAQGQK-KEVTKTRNFTKFGKNAAQVVPRRPAFEHKAVKPVSLKHNDYKIIR 62
Query: 233 FPLTSEAAMKKIEDNNTLXFIVHTSANK 150
P+TS+ + KIE+ NT+ F V A K
Sbjct: 63 GPVTSDKSTVKIENENTMTFWVDIKATK 90
>UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;
n=2; Ostreococcus|Rep: RL23A_FRIAG 60S ribosomal protein
L23A - Ostreococcus tauri
Length = 259
Score = 45.6 bits (103), Expect = 0.001
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 41/130 (31%)
Frame = -2
Query: 416 VTKALKAQRKVVKGEHGKRVRK-IRNSVHFR----------------RPKTFEPPRHPKY 288
V KA KA + V KG GK ++K + H R RP+T + R P Y
Sbjct: 80 VNKASKAAKFVKKGAKGKLLKKRFSATFHSRETDHRERLTSDVLTVYRPRTLKHERKPAY 139
Query: 287 PRKSLPKRNRMDAYN------------------------IIKFPLTSEAAMKKIEDNNTL 180
PR S+P + ++D ++ I+K PL +E A+ K E+NNTL
Sbjct: 140 PRVSVPSKPKLDRFSVPEDSIDGRETDRRTLSSLNHSSQILKHPLANETALAKTENNNTL 199
Query: 179 XFIVHTSANK 150
FIV ANK
Sbjct: 200 VFIVDARANK 209
>UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast
precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal
protein L23, chloroplast precursor - Spinacia oleracea
(Spinach)
Length = 198
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -2
Query: 326 RPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANK 150
+PKT + + KYPR+ L D Y I++ P+ +EAA+K I D N+L F V A+K
Sbjct: 92 QPKTSKKAKKLKYPRRIL------DVYQILQSPIITEAAIKNIADENSLLFTVDVRADK 144
>UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2001000 - Monodelphis domestica
Length = 144
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -2
Query: 257 MDAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANK 150
+D Y IIKFPL +E+AMKKIED++ L F NK
Sbjct: 41 LDHYAIIKFPLPTESAMKKIEDDDILVFPADIKVNK 76
>UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L23A -
Guillardia theta (Cryptomonas phi)
Length = 117
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = -2
Query: 281 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANKH 147
K++ KRN + Y + +P+TSE+AMKKI+ +NTL F+V NK+
Sbjct: 26 KNIQKRNFI--YKQLIYPVTSESAMKKIQTSNTLTFLVEPMNNKN 68
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 39.9 bits (89), Expect = 0.065
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = +1
Query: 211 AASDVXGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 351
A S V NLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 166 AYSVVSRNLMIARWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 212
>UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L23P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 86
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 257 MDAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANKHHXQGCXQE 123
MD Y++I P SE M +I D N + F+V SANK + Q+
Sbjct: 1 MDPYSVIIKPQLSEKTMNQIYDENKITFVVRRSANKRVIKEAFQD 45
>UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila
melanogaster|Rep: GM06171p - Drosophila melanogaster
(Fruit fly)
Length = 290
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -1
Query: 291 IPKEVSA*EKSHGCLQHH*IPXHV*SSNEED*R*QHLGL 175
+P+E+ A ++ HG +QHH +P +EED QH GL
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGL 201
>UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27;
Archaea|Rep: 50S ribosomal protein L23P - Methanopyrus
kandleri
Length = 95
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 254 DAYNIIKFPLTSEAAMKKIEDNNTLXFIVHTSANK 150
D ++++ +P+ +E AM+ +E N L FIV ANK
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANK 45
>UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L23a - Homo sapiens
Length = 87
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -2
Query: 209 MKKIEDNNTLXFIVHTSANKH 147
MKKIEDNNTL F V A KH
Sbjct: 1 MKKIEDNNTLVFTVDVKATKH 21
>UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 122
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -2
Query: 401 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 234
K +K+ + ++GK++R+ +N RRPK + R PK +K P++ + D N IK
Sbjct: 36 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPEKRQKD--NTIK 90
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -2
Query: 401 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 261
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 9 KNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 55
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -2
Query: 401 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 261
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 18 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 64
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -2
Query: 401 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 261
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 27 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 73
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -2
Query: 392 RKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 261
+K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 3 KKIRRQKNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 46
>UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 73
Score = 33.1 bits (72), Expect = 7.5
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -2
Query: 371 HGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 192
H K RK+ N+ ++PK F P P PR SL + D I + + + + + +
Sbjct: 6 HKKHCRKLYNTYSTKKPKRFFKPSRPPPPRNSLVDDDDDDDDKTITYSIGNLETLLLLLN 65
Query: 191 NN 186
NN
Sbjct: 66 NN 67
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,606,562
Number of Sequences: 1657284
Number of extensions: 7801820
Number of successful extensions: 22210
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 21611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22180
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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