Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L15
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0777 - 6017131-6017243,6018069-6018339,6018432-6018617,601...    29   3.3  
05_04_0218 - 19147772-19148089,19149183-19149272,19149486-191497...    29   5.8  
10_07_0096 - 12825556-12825594,12825700-12825738,12825824-128261...    28   7.6  
10_01_0330 + 3614562-3614574,3614676-3615118,3617700-3617825,361...    28   7.6  
02_05_0066 - 25546545-25546999,25547104-25547199,25547294-25547441     28   7.6  

>01_01_0777 -
           6017131-6017243,6018069-6018339,6018432-6018617,
           6018703-6018735,6018827-6018925,6019042-6019281,
           6019747-6020064,6020197-6020254,6020333-6020389,
           6020577-6020792,6020885-6021000
          Length = 568

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 260 SLKETMIFHSICIDISITFFFVQMHRLPPLIIDDPNTV 373
           SL + +I     IDI +TFF   + +   L++DDP  +
Sbjct: 71  SLVDNIIDSFFAIDIILTFFLAYLDQKSYLLVDDPKRI 108


>05_04_0218 -
           19147772-19148089,19149183-19149272,19149486-19149705,
           19149958-19150214
          Length = 294

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 586 YGAPDGEWLYRPWTSTMLG 642
           YG PD  W Y+ WTS   G
Sbjct: 161 YGFPDYTWQYKKWTSNRAG 179


>10_07_0096 -
           12825556-12825594,12825700-12825738,12825824-12826112,
           12826444-12826955,12827067-12827336,12827423-12827869,
           12827948-12828676
          Length = 774

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 577 PRAYGAPDGEWLYRPWTS 630
           P  YG PD  W Y+ WTS
Sbjct: 287 PWKYGFPDYAWQYKKWTS 304


>10_01_0330 +
           3614562-3614574,3614676-3615118,3617700-3617825,
           3618379-3618786,3618871-3619311,3619399-3619779
          Length = 603

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 577 PRAYGAPDGEWLYRPWTS 630
           P  YG PD  W Y+ WTS
Sbjct: 372 PWKYGFPDYAWQYKKWTS 389


>02_05_0066 - 25546545-25546999,25547104-25547199,25547294-25547441
          Length = 232

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 577 PRAYGAPDGEWLYRPWTSTMLGTKPTRCLPSSNLHKPRLK 696
           P A  AP G+ +  P+  T+   K     PS N HKP  K
Sbjct: 157 PLAVSAPGGDKVRVPYKVTIPLRKVKAAKPSENKHKPEQK 196


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,039,196
Number of Sequences: 37544
Number of extensions: 398600
Number of successful extensions: 798
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)