Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L15
         (808 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF366516-1|AAK62930.1|   80|Homo sapiens T-cell receptor V delta...    30   8.6  
AF366515-1|AAK62929.1|   79|Homo sapiens T-cell receptor V delta...    30   8.6  

>AF366516-1|AAK62930.1|   80|Homo sapiens T-cell receptor V delta 1
           protein.
          Length = 80

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 776 FCVLKERYLIPERPSGRYTFCANDLFFFKRGLWRLLDGRQRVGFVPSI 633
           FC L ER+++P   +G Y +  ND   F +G    ++ R +    PS+
Sbjct: 11  FCALGERFVLPPITTGGYAY-LNDKLIFGKGTRVTVEPRSQPHTKPSV 57


>AF366515-1|AAK62929.1|   79|Homo sapiens T-cell receptor V delta 1
           protein.
          Length = 79

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 776 FCVLKERYLIPERPSGRYTFCANDLFFFKRGLWRLLDGRQRVGFVPSI 633
           FC L ER+++P   +G Y +  ND   F +G    ++ R +    PS+
Sbjct: 10  FCALGERFVLPPITTGGYAY-LNDKLIFGKGTRVTVEPRSQPHTKPSV 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,799,774
Number of Sequences: 237096
Number of extensions: 2324457
Number of successful extensions: 11659
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11659
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)