Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L15
         (808 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37093-6|CAJ85783.1|  176|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z37093-5|CAJ85782.1|  212|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical ...    29   5.2  
Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical p...    28   9.0  

>Z37093-6|CAJ85783.1|  176|Caenorhabditis elegans Hypothetical
           protein ZK669.5b protein.
          Length = 176

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -2

Query: 408 YVIFLEWPVKKKTVFGSSIIKGGNLCIWTKKNVIDMSIQIEWKIIVSFKEYGSK 247
           ++IF    V KKT+  S   +G N  IWT   V D  + IE  +   ++E  SK
Sbjct: 14  FLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVDDEKVLIEATVSQKWEEGMSK 67


>Z37093-5|CAJ85782.1|  212|Caenorhabditis elegans Hypothetical
           protein ZK669.5a protein.
          Length = 212

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -2

Query: 408 YVIFLEWPVKKKTVFGSSIIKGGNLCIWTKKNVIDMSIQIEWKIIVSFKEYGSK 247
           ++IF    V KKT+  S   +G N  IWT   V D  + IE  +   ++E  SK
Sbjct: 14  FLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVDDEKVLIEATVSQKWEEGMSK 67


>AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical
           protein C17E7.7 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -2

Query: 264 KEYGSKPALSKG*YLTCYLSKMSFRRVLCLPMEY--KVNNSFF 142
           K++GS+P       LTC   KM FRRV+   +EY  K +N+ F
Sbjct: 60  KDFGSQPKQ----VLTCDACKMFFRRVVTEKLEYTCKCSNNCF 98


>Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical
           protein F35E12.10 protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +1

Query: 385 GPLK-EDYIGLLLSNIKQSVLLAAHRDTTVAVWL 483
           GPL+ +D+I L+ +N +Q  +     DTT+ VWL
Sbjct: 74  GPLQADDHILLIDNNNQQREVRPTTNDTTIPVWL 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,284,102
Number of Sequences: 27780
Number of extensions: 389536
Number of successful extensions: 860
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)