Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L14
(854 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 71 2e-13
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 67 3e-12
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 38 0.002
SPAC29A4.14c |||peroxin-3 |Schizosaccharomyces pombe|chr 1|||Manual 31 0.21
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 28 1.9
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 27 2.6
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 2.6
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 27 4.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 4.5
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 26 7.8
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 71.3 bits (167), Expect = 2e-13
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 2/211 (0%)
Frame = -3
Query: 654 EFAESATEGPSVIFLKDLARKYGLVIVSPILEKDD--VGTWWNTAVVIDEEGNVLGKHRK 481
+ AE A EGPS + +LA KY + I+ EK++ +N+ + I E GN+ G +RK
Sbjct: 59 QIAEIAGEGPSFKTMSNLAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRK 118
Query: 480 NHLPSVGSFSETPYYAPGNMGHPVFDTKYAKIAVNICYGRHQALNWLMLGLNGAEIVFNP 301
HL +E ++ G+ P+F+T + K+ V IC+ + LNGA+++
Sbjct: 119 VHLFD----TERKHFKKGS-DFPIFETSFGKLGVMICWDTAFPEVARIHALNGADLLVVA 173
Query: 300 SATVAEFGESFWNIEARNAAIANGYFTCSINRVGTETFNSTSGGTIERTYYGSSYVTAPN 121
+ + + W++ + A N + NRVGT+ + +++G S + P
Sbjct: 174 TNWENPYSDD-WDLVTKARAFENCIPLVAANRVGTDE---------KLSFFGHSKIIGPT 223
Query: 120 GCRTPALSRLRDGLMIVEIDLNLNRQVRDQW 28
G AL ++G++ +DL+ + +R +
Sbjct: 224 GKVIKALDEEKEGVISYTVDLDDAKPLRKNY 254
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 66.9 bits (156), Expect = 3e-12
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Frame = -3
Query: 744 AASEGVQIICLEETWSMPFFLCTREKEKWDEFAESATEG-PSVIFLKDLARKYGLVIVSP 568
AA G +I L E ++ P+ ++++AE E PS L +A+ +
Sbjct: 71 AAKNGSNVIVLPEIFNSPY-----GTGYFNQYAEPIEESSPSYQALSSMAKDTKTYLFGG 125
Query: 567 ILEKDDVGTWWNTAVVIDEEGNVLGKHRKNHL-----PSVGSFSETPYYAPGNMGHPVFD 403
+ + G +NTA+V D G ++ HRK HL P SF E+ +PG+ + D
Sbjct: 126 SIPERKDGKLYNTAMVFDPSGKLIAVHRKIHLFDIDIPGGVSFRESDSLSPGD-AMTMVD 184
Query: 402 TKYAKIAVNICYGRHQALNWLMLGLNGAEIVFNPSATVAEFGESFWNIEARNAAIANGYF 223
T+Y K + ICY ++ NG ++ P A G W + AR A+ N F
Sbjct: 185 TEYGKFGLGICYDIRFPELAMIAARNGCSVMIYPGAFNLSTGPLHWELLARARAVDNEMF 244
Query: 222 T--CSINRVGTETFNSTSGGTI 163
C+ R ++S T+
Sbjct: 245 VACCAPARDMNADYHSWGHSTV 266
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 37.5 bits (83), Expect = 0.002
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 12/254 (4%)
Frame = -3
Query: 762 EKIINTAASEGVQIICLEETWSMPFFLCTREKEKWDEFAESATEGPSVIFLKDL---ARK 592
+++I+ AA++G + I E F+ DE E F++D+ A K
Sbjct: 23 KELISQAAAKGAKCIFFPEASD---FIAHNS----DEAIELTNHPDCSKFIRDVRESATK 75
Query: 591 YGLVIVSPILEKDDV-GTWWNTAVVIDE-EGNVLGKHRKNHLPSVG-----SFSETPYYA 433
+ + + + E V N+++ I+ G ++ ++ K HL V + E+
Sbjct: 76 HSIFVNICVHEPSKVKNKLLNSSLFIEPLHGEIISRYSKAHLFDVEIKNGPTLKESNTTL 135
Query: 432 PGNMGHPVFDTKYAKIAVNICYGRHQALNWLMLGLNGAEIVFNPSATVAEFGESFWNIEA 253
G P T K+ IC+ + L GA I+ PSA + G + W +
Sbjct: 136 RGEAILPPCKTPLGKVGSAICFDIRFPEQAIKLRNMGAHIITYPSAFTEKTGAAHWEVLL 195
Query: 252 RNAAIANGYFTCSINRVGTETFNSTSGGTIERTYYGSSYVTAPNGCRTPALSRLR--DGL 79
R A+ + + + + G +R YG S + P G S + +GL
Sbjct: 196 RARALDSQCYVIAPAQGGKH--------NEKRASYGHSMIVDPWGTVIAQYSDISSPNGL 247
Query: 78 MIVEIDLNLNRQVR 37
+ ++DLNL VR
Sbjct: 248 IFADLDLNLVDHVR 261
>SPAC29A4.14c |||peroxin-3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 346
Score = 31.1 bits (67), Expect = 0.21
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = -3
Query: 684 LCTREKEKWDEFAESATEGPSVIFLKDLARKYGLV--IVSPILEKDDVGTWWNTAVVIDE 511
L TR E + + + +G + L ++ ++Y + ++ +LE +D T + ++V+
Sbjct: 217 LTTRVVEVFVNNYQFSIDGNKEVLLAEIPKQYIVTGNLLYRVLELEDFATQMDASIVMKN 276
Query: 510 EGNVLGKHRKNHLPSV 463
E L +H +LPS+
Sbjct: 277 ELIALNEHMLTYLPSI 292
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 623 LGPSVADSANSSHFSFSLVHR 685
LGP++ +++SHF+F L H+
Sbjct: 1025 LGPNLRSDSSTSHFAFDLAHQ 1045
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 548 TSSFSNIGDTITNPYF--LAKS--FKKI-TLGPSVADSANSSHFSFSLVHRKNG 694
T SF NIG NP F + K ++I LG V+ + S F +++R NG
Sbjct: 46 TKSFDNIGQMSCNPAFGGIGKGTLMREIDALGGVVSGVCDESAIQFHMLNRSNG 99
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 691 WHRPCFFQAYYLNAL 735
WHR C F AY LN L
Sbjct: 233 WHRKCAFDAYILNYL 247
>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
related|Schizosaccharomyces pombe|chr 2|||Manual
Length = 773
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 646 RISHRRSQCNFFKGFSKKIWIG 581
RIS+RRS NF++ K WIG
Sbjct: 746 RISNRRSFRNFYQAGYKYAWIG 767
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -2
Query: 751 KYGCIRGRSNNMLGRNMVDAILSMHERKGKVG-*ICRISHRRSQCNFFKGFSKKIWIGNC 575
KYG I N+ML + V +LS+ K+ + R S C+F K + IG+
Sbjct: 2386 KYGIIDFNQNSMLVSDFVLPVLSLQFSNSKIAEYLWRDFFNASVCSFTKD-EIPLCIGSI 2444
Query: 574 VSYIRK 557
+S++ +
Sbjct: 2445 ISFLSR 2450
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 558 KDDVGTWWNTAVVIDEEGNVLGKHRKNHLPSVGSFSETP 442
KD+ + N A ++ + +V +HR+N +PSV P
Sbjct: 341 KDNNDYYDNAARILKQMFHVAERHRRNRVPSVQEVLNPP 379
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,858,894
Number of Sequences: 5004
Number of extensions: 89267
Number of successful extensions: 269
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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