Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L14
         (854 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.96 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    26   1.7  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   9.0  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 26.6 bits (56), Expect = 0.96
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = -3

Query: 639  ATEGPSVIFLKDLARKYGLVIVSPILEKDD---VGTWWNTAVVIDEEGN---VLGKHR 484
            ATE   +   + + RK  L ++ PIL+KD+   VG   + A + DE+ +   + GKHR
Sbjct: 1291 ATEYECIKQGQQVVRKSPLRVIRPILDKDNVMRVGGRLSNADIKDEQKHPVIIPGKHR 1348


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +1

Query: 310 NDFSSIQT*HQPIERLMSPVANVYR----NFSVFCIEHWVAHVTRGVIWR 447
           +D+  + T H P E +  P   +Y     N+ V  +   + H T  V+W+
Sbjct: 90  DDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWK 139


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 155 LITDPVMLQRLTDVELRHYRD*G 87
           +ITDP M++ +   + RH+ D G
Sbjct: 79  MITDPEMIRNVLVRDFRHFYDRG 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 965,006
Number of Sequences: 2352
Number of extensions: 22988
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)