Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L09
         (812 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0158 + 2332381-2333211                                           30   1.9  
05_05_0309 - 23987669-23988042,23989485-23989560                       29   4.4  
03_02_0817 + 11492699-11492774,11493605-11493978                       29   4.4  
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651     28   7.7  

>09_01_0158 + 2332381-2333211
          Length = 276

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -1

Query: 311 VYSVSASSQPEATPRSLAPCTFINVINV*KN-LTNSV 204
           V ++SA+    A PR LA C ++NVI++  N LT S+
Sbjct: 127 VLNLSANRLSGAIPRDLARCAYLNVIDLHANQLTGSI 163


>05_05_0309 - 23987669-23988042,23989485-23989560
          Length = 149

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDGQ+ YEEFV +M +K
Sbjct: 133 GDGQINYEEFVKVMMAK 149


>03_02_0817 + 11492699-11492774,11493605-11493978
          Length = 149

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDGQ+ YEEFV +M +K
Sbjct: 133 GDGQINYEEFVKVMMAK 149


>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
          Length = 187

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDGQ+ YEEFV  M +K
Sbjct: 133 GDGQINYEEFVKCMMAK 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,366,378
Number of Sequences: 37544
Number of extensions: 278851
Number of successful extensions: 718
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)