Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L09
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    36   0.034
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    36   0.034
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    29   5.2  
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        29   5.2  
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z82090-4|CAB05008.2|  543|Caenorhabditis elegans Hypothetical pr...    28   6.9  
L14433-5|AAA27976.2|  202|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDGQV YEEFVTMMT+K
Sbjct: 133 GDGQVNYEEFVTMMTTK 149


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDGQV YEEFVTMMT+K
Sbjct: 133 GDGQVNYEEFVTMMTTK 149


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDG++ YEEFV MM+++
Sbjct: 202 GDGEIDYEEFVKMMSNQ 218


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDG++ YEEFV MM+++
Sbjct: 145 GDGEIDYEEFVKMMSNQ 161


>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
           protein C37C3.6c protein.
          Length = 1487

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 530 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 423
           C RS    VQ E  +C+  C G SV  +S  NL  C
Sbjct: 88  CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122


>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
           protein C37C3.6a protein.
          Length = 1558

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 530 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 423
           C RS    VQ E  +C+  C G SV  +S  NL  C
Sbjct: 88  CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122


>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
           protein C37C3.6b protein.
          Length = 2167

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 530 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 423
           C RS    VQ E  +C+  C G SV  +S  NL  C
Sbjct: 88  CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122


>Z82090-4|CAB05008.2|  543|Caenorhabditis elegans Hypothetical
           protein ZK337.2 protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 446 TRARHLYHHIATHTGRLPFVPLQLNFS 526
           +R+ HL  H+ THTG  P+     N+S
Sbjct: 407 SRSDHLSTHLRTHTGEKPYACPMCNYS 433


>L14433-5|AAA27976.2|  202|Caenorhabditis elegans Hypothetical
           protein C50C3.5 protein.
          Length = 202

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 811 GDGQVXYEEFVTMMTSK 761
           GDGQ+ +EEF+  +TSK
Sbjct: 99  GDGQIDFEEFLAAVTSK 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,119,413
Number of Sequences: 27780
Number of extensions: 280488
Number of successful extensions: 730
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)