Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L06
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein prot... 35 0.27
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 32 2.5
AF488549-1|AAO49469.1| 890|Homo sapiens hyperpolarization activ... 32 2.5
AF064876-1|AAC39759.1| 749|Homo sapiens ion channel BCNG-1 prot... 32 2.5
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 32 2.5
BC130580-1|AAI30581.1| 1467|Homo sapiens CAMSAP1 protein protein. 31 4.3
BC012778-1|AAH12778.2| 935|Homo sapiens CAMSAP1 protein protein. 31 4.3
BC010646-1|AAH10646.1| 510|Homo sapiens CAMSAP1 protein protein. 31 4.3
AL355574-1|CAI14116.2| 1602|Homo sapiens calmodulin regulated sp... 31 4.3
AL353636-1|CAI40811.2| 1602|Homo sapiens calmodulin regulated sp... 31 4.3
AL158822-3|CAI39239.1| 225|Homo sapiens calmodulin regulated sp... 31 4.3
AL158822-2|CAI39238.1| 143|Homo sapiens calmodulin regulated sp... 31 4.3
AL158822-1|CAI39237.2| 1602|Homo sapiens calmodulin regulated sp... 31 4.3
AJ519841-1|CAD58627.1| 1324|Homo sapiens calmodulin regulated sp... 31 4.3
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 31 5.7
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 5.7
>AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein protein.
Length = 1099
Score = 35.1 bits (77), Expect = 0.27
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -2
Query: 715 QQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPES 578
QQ++Q +R+++ +RK P+ SP S SAST + TTP S
Sbjct: 940 QQEEQKNRKKKNTKRKPAPNTASPSI-STSASASTGTTSASTTPAS 984
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 727 VTSLQQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPESKSVDPSN 557
+ S ++ + D+EE AQR+ E S+ P + SP AS T E++ E + + S+
Sbjct: 992 IRSTARKTRRDKEELRAQRRRERSKTPPSNLSPIEDASPT-EELRQAAEMEELHRSS 1047
>AF488549-1|AAO49469.1| 890|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel
protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -2
Query: 733 AXVTSLQQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPES 578
A SL QQQ + ++ + +P +PSP+ +P +ST NEV + ++
Sbjct: 724 ASQLSLMQQQPQQQVQQSQPPQTQPQQPSPQPQTP--GSSTPKNEVHKSTQA 773
>AF064876-1|AAC39759.1| 749|Homo sapiens ion channel BCNG-1
protein.
Length = 749
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -2
Query: 733 AXVTSLQQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPES 578
A SL QQQ + ++ + +P +PSP+ +P +ST NEV + ++
Sbjct: 603 ASQLSLMQQQPQQQVQQSQPPQTQPQQPSPQPQTP--GSSTPKNEVHKSTQA 652
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 727 VTSLQQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPESKSVDPSN 557
+ S ++ + D+EE AQR+ E S+ P + SP AS T E++ E + + S+
Sbjct: 1067 IRSTARKTRRDKEELRAQRRRERSKTPPSNLSPIEDASPT-EELRQAAEMEELHRSS 1122
>BC130580-1|AAI30581.1| 1467|Homo sapiens CAMSAP1 protein protein.
Length = 1467
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 1210 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 1259
>BC012778-1|AAH12778.2| 935|Homo sapiens CAMSAP1 protein protein.
Length = 935
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 678 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 727
>BC010646-1|AAH10646.1| 510|Homo sapiens CAMSAP1 protein protein.
Length = 510
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 253 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 302
>AL355574-1|CAI14116.2| 1602|Homo sapiens calmodulin regulated
spectrin-associated protein 1 protein.
Length = 1602
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 1345 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 1394
>AL353636-1|CAI40811.2| 1602|Homo sapiens calmodulin regulated
spectrin-associated protein 1 protein.
Length = 1602
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 1345 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 1394
>AL158822-3|CAI39239.1| 225|Homo sapiens calmodulin regulated
spectrin-associated protein 1 protein.
Length = 225
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 35 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 84
>AL158822-2|CAI39238.1| 143|Homo sapiens calmodulin regulated
spectrin-associated protein 1 protein.
Length = 143
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 44 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 93
>AL158822-1|CAI39237.2| 1602|Homo sapiens calmodulin regulated
spectrin-associated protein 1 protein.
Length = 1602
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 1345 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 1394
>AJ519841-1|CAD58627.1| 1324|Homo sapiens calmodulin regulated
spectrin-associated protein 1 protein.
Length = 1324
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 718 LQQQQQADREERGAQR-KAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 572
L+++QQ EE+G + K++P +P P+ + S S + + +TP++ S
Sbjct: 1067 LRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLS 1116
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 658 SRPSPEHNSPQHSASTTSNEVKTTPESKSVDPSN 557
S PSP +SP S+S+TS+ ++P S S S+
Sbjct: 198 SSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSS 231
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 658 SRPSPEHNSPQHSASTTSNEVKTTPESKSVDPSN 557
S PSP +SP S+S+TS+ ++P S S S+
Sbjct: 199 SSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSS 232
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,369,369
Number of Sequences: 237096
Number of extensions: 1219938
Number of successful extensions: 4561
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4511
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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