Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L02
         (854 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open read...   106   9e-23
AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens ...   106   9e-23
AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein pr...   106   9e-23
BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open read...   105   3e-22

>AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score =  106 bits (255), Expect = 9e-23
 Identities = 50/103 (48%), Positives = 68/103 (66%)
 Frame = -3

Query: 321 SAKEKLKKAVKEYGSTVIVFHVTISLISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAA 142
           S  ++LKK  +EYG+  +  H+ ISLISLG  Y++VSSGVD+ AIL  L  +E  V    
Sbjct: 84  SKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQSKM 143

Query: 141 GSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLRNIGILK 13
            +   TFV+AY +HK+FAP RI+ITL + P IVR+ R +G  K
Sbjct: 144 AAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRKVGFFK 186


>AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0265 fis, clone NT2RP3003235. ).
          Length = 192

 Score =  106 bits (255), Expect = 9e-23
 Identities = 50/103 (48%), Positives = 68/103 (66%)
 Frame = -3

Query: 321 SAKEKLKKAVKEYGSTVIVFHVTISLISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAA 142
           S  ++LKK  +EYG+  +  H+ ISLISLG  Y++VSSGVD+ AIL  L  +E  V    
Sbjct: 84  SKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQSKM 143

Query: 141 GSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLRNIGILK 13
            +   TFV+AY +HK+FAP RI+ITL + P IVR+ R +G  K
Sbjct: 144 AAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRKVGFFK 186


>AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein
           protein.
          Length = 192

 Score =  106 bits (255), Expect = 9e-23
 Identities = 50/103 (48%), Positives = 68/103 (66%)
 Frame = -3

Query: 321 SAKEKLKKAVKEYGSTVIVFHVTISLISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAA 142
           S  ++LKK  +EYG+  +  H+ ISLISLG  Y++VSSGVD+ AIL  L  +E  V    
Sbjct: 84  SKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQSKM 143

Query: 141 GSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLRNIGILK 13
            +   TFV+AY +HK+FAP RI+ITL + P IVR+ R +G  K
Sbjct: 144 AAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRKVGFFK 186


>BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score =  105 bits (251), Expect = 3e-22
 Identities = 49/103 (47%), Positives = 67/103 (65%)
 Frame = -3

Query: 321 SAKEKLKKAVKEYGSTVIVFHVTISLISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAA 142
           S  ++LKK  +EYG+  +  H+ ISLISLG  Y++VSSGVD+ AIL  L  +E  V    
Sbjct: 84  SKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQSKM 143

Query: 141 GSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLRNIGILK 13
            +   TFV+AY +HK+F P RI+ITL + P IVR+ R +G  K
Sbjct: 144 AAGTSTFVVAYAIHKLFVPVRISITLVSVPLIVRYFRKVGFFK 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,053,927
Number of Sequences: 237096
Number of extensions: 2860582
Number of successful extensions: 8755
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8755
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)