Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_L02
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-20|CAB60503.2| 263|Caenorhabditis elegans Hypothetical... 52 7e-07
Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical pr... 31 0.79
U64849-7|AAC48048.1| 307|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical pr... 29 3.2
U28928-11|AAA68342.3| 824|Caenorhabditis elegans Hypothetical p... 29 4.2
Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated... 29 5.6
AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type chlo... 29 5.6
AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin... 28 7.4
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 9.7
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 9.7
>AL132860-20|CAB60503.2| 263|Caenorhabditis elegans Hypothetical
protein Y56A3A.22 protein.
Length = 263
Score = 51.6 bits (118), Expect = 7e-07
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = -3
Query: 384 EKIINKIVGVRNMSTNVKPPVSAKEKLKKAVKEYGSTVIVFHVTISLISLGSCYLLVSSG 205
E+ + K + M + P + K+K K Y + H + YL+V SG
Sbjct: 59 EQKLAKTAKIEQMKAE-EAPKTLFAKVKYYFKRYWYIAVPAHAASCTAWFIALYLVVKSG 117
Query: 204 VDLVAILKYLNIEEGTV--LKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFIVRHLR 31
VD++++L++L++ + V +K AG V++ ++KI PFR TL LR
Sbjct: 118 VDVISLLEWLHMPDAIVEKVKNTPETAGVVVVSLILYKIAMPFRYMTTLLLIQATFWTLR 177
Query: 30 NIGILK 13
+G LK
Sbjct: 178 RLGKLK 183
>Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical
protein F47H4.7 protein.
Length = 553
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 118 YSLYSAQNFRSIPDSHNLDCNTFHRSTLKKYWNFKTWYK 2
Y L+ SI +++ CNT ++ +K YW+F+ WY+
Sbjct: 199 YILFECLQGNSIFEAYEKLCNTVGKNAVK-YWDFEYWYQ 236
>U64849-7|AAC48048.1| 307|Caenorhabditis elegans Hypothetical
protein K04A8.2 protein.
Length = 307
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 201 DLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITL 64
DL +LK I + L G GT I+Y VH+I+ P R+A+ +
Sbjct: 220 DLREMLKIKCILKKGGLLFLGVPIGTDAISYNVHRIYGPVRLALMM 265
>Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical
protein K01G5.10 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -1
Query: 641 LLILTIKNNMTCLK-LI*QYKLTHMLTNMIVEGLLAYLRPCRATFQVLSQETILISTCQ- 468
++++ I N + LK L+ Q+ L + + ++ G + Y +P FQ++ LIS +
Sbjct: 142 IILVVISNFDSRLKSLLSQFNLLDLFSMTVLSGEIGYEKPDEKIFQLVVNHFDLISPSEI 201
Query: 467 AHNGDKATNTY 435
H GD N +
Sbjct: 202 LHIGDNLKNDF 212
>Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical
protein F47H4.4 protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 130 WDFCYSLYSAQNFRSIPDSHNLDCNTFHRSTLKKYWNFKTWYK 2
W + Y S N SI +++ C T ++ +K YW F+ WY+
Sbjct: 164 WGYIYFECSQSN--SIFEAYEKMCETVGKNAVK-YWEFEYWYQ 203
>U28928-11|AAA68342.3| 824|Caenorhabditis elegans Hypothetical
protein C44B7.11 protein.
Length = 824
Score = 29.1 bits (62), Expect = 4.2
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -3
Query: 300 KAVKEYGSTVIVFHVT-ISLISLGSCYLLVSSGVDLVAILKYLNIEEGTVLKAAGSNAGT 124
KA +EYGST+ + H+T IS I L Y ++SG L A+L I+ A T
Sbjct: 414 KAREEYGSTLELIHLTLISGILLAFTYYDIASGF-LFALLLVPAIKSIITYFGAWPTCPT 472
Query: 123 FVIAYTVHKIFAPFRIAITLT 61
F T+ F +AI T
Sbjct: 473 FNTILTLILSFPGCAMAIYTT 493
>Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical
protein C38D9.6 protein.
Length = 511
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 118 YSLYSAQNFRSIPDSHNLDCNTFHRSTLKKYWNFKTWYK 2
Y + SI +++ C T ++ +K YW F+ WY+
Sbjct: 157 YIFFECSQSNSIFEAYEKMCETVGKNAVK-YWEFEYWYQ 194
>Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical
protein R07B7.1 protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = -3
Query: 330 PPVSAKEKLKKAVKEYG-STVIVFHVTISLISLGSCYLLVSSGVDLVAIL------KYLN 172
P S K + +G +T+++F + L++L + + V SGV + AIL +
Sbjct: 454 PEESVKSMFHSPINSFGVTTLVIFGIEYFLLTLWTFGISVPSGVFIPAILTGAAWGRLFG 513
Query: 171 I-EEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTA 58
I E G + G + +A ++ R+ I+LTA
Sbjct: 514 IFVERLFPSVTGIDPGKYALAGAAAQLGGVVRMTISLTA 552
>Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical
protein R09A8.2 protein.
Length = 891
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -3
Query: 669 NRERDISGPVINSHYKKQHDMSKIDITIQVDPYV--NKYDCRGAVSLSSSMQSNVPSPFT 496
N ISG +N+ Y++ + D Q+DP + N D + S ++Q++
Sbjct: 283 NGMNSISGNTLNTSYEETRQLKNSDHVKQIDPQMKGNSVDAHKGLQFSMTVQNSSCLSSD 342
Query: 495 GN 490
GN
Sbjct: 343 GN 344
>AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated
chloride channelCLH-6 protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = -3
Query: 330 PPVSAKEKLKKAVKEYG-STVIVFHVTISLISLGSCYLLVSSGVDLVAIL------KYLN 172
P S K + +G +T+++F + L++L + + V SGV + AIL +
Sbjct: 454 PEESVKSMFHSPINSFGVTTLVIFGIEYFLLTLWTFGISVPSGVFIPAILTGAAWGRLFG 513
Query: 171 I-EEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTA 58
I E G + G + +A ++ R+ I+LTA
Sbjct: 514 IFVERLFPSVTGIDPGKYALAGAAAQLGGVVRMTISLTA 552
>AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type
chloride channel CLH-6 protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = -3
Query: 330 PPVSAKEKLKKAVKEYG-STVIVFHVTISLISLGSCYLLVSSGVDLVAIL------KYLN 172
P S K + +G +T+++F + L++L + + V SGV + AIL +
Sbjct: 454 PEESVKSMFHSPINSFGVTTLVIFGIEYFLLTLWTFGISVPSGVFIPAILTGAAWGRLFG 513
Query: 171 I-EEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTA 58
I E G + G + +A ++ R+ I+LTA
Sbjct: 514 IFVERLFPSVTGIDPGKYALAGAAAQLGGVVRMTISLTA 552
>AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin
protein 20 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 568 NIWVNLYCYINFRHVMLFFIVRINNRTGNISFSVRRKSPYFGCVNIN 708
N+W+ LYC N+R L+ I+ N F R CV +N
Sbjct: 79 NVWLGLYCINNYRSNCLWDDSNISTDQRN-GFQSRPNVTQGNCVTVN 124
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 337 CEAPCKC*RETQKGC 293
C PCKC RE +GC
Sbjct: 717 CRFPCKCARENSEGC 731
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 337 CEAPCKC*RETQKGC 293
C PCKC RE +GC
Sbjct: 717 CRFPCKCARENSEGC 731
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,442,272
Number of Sequences: 27780
Number of extensions: 463006
Number of successful extensions: 1352
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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