Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_L01
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    50   2e-06
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    50   2e-06
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    50   3e-06
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    50   3e-06
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    42   7e-04
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    37   0.016
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    37   0.021
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = -1

Query: 843 SAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 751
           SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 270 SAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = -1

Query: 843 SAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 751
           SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 270 SAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -1

Query: 843 SAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 751
           SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 283 SAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -1

Query: 843 SAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 751
           SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 283 SAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = -1

Query: 843 SAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 751
           +A +KG  SNV R TGGA VL +YDEI+ ++
Sbjct: 270 TALYKGGLSNVFRATGGALVLTIYDEIQHLI 300


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -1

Query: 840 AXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 751
           A F GA  N +RGTG A VL +Y+E++K +
Sbjct: 277 AFFHGALVNAIRGTGAALVLAIYNELQKYM 306


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -1

Query: 834 FKGAFSNVLRGTGGAFVLVLYDEIKK 757
           +KGA +N+ R  GGA V+ LY+EI K
Sbjct: 279 YKGALANIFRSAGGALVMALYEEIHK 304


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 834 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 751
           ++GA +N LR TGGA ++  Y E  K +
Sbjct: 271 YRGALTNSLRSTGGALIITFYYEFSKYM 298


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -1

Query: 840 AXFKGAFSNVLR-GTGGAFVLVLYDEI 763
           A +KG    V+R G GGA +L++YDE+
Sbjct: 255 ALYKGLLPKVMRLGPGGAVMLIVYDEV 281


>Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical
           protein F25H9.3 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 124 VNY*VQHTNLTSHKCQRYII 183
           +NY  Q TNL + KC RY++
Sbjct: 13  INYFTQFTNLEAVKCHRYVL 32


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,252,004
Number of Sequences: 27780
Number of extensions: 348808
Number of successful extensions: 553
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)