Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_K09
(774 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p pro... 200 2e-51
AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-P... 200 2e-51
AY392453-1|AAQ84213.1| 89|Drosophila melanogaster translin pro... 100 4e-21
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro... 36 0.062
AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p pro... 36 0.062
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein. 36 0.062
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P... 36 0.062
DQ448818-1|ABE01846.1| 298|Drosophila melanogaster Trax protein. 33 0.58
AY047514-1|AAK77246.1| 258|Drosophila melanogaster GH01922p pro... 32 0.76
AE014297-2027|AAF55183.2| 258|Drosophila melanogaster CG5063-PA... 32 0.76
AE014297-2026|AAN13659.1| 292|Drosophila melanogaster CG5063-PB... 31 1.3
AL138972-4|CAB72287.1| 435|Drosophila melanogaster EG:BACR25B3.... 31 1.8
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 31 1.8
AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p pro... 30 3.1
AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-P... 30 3.1
>AY118870-1|AAM50730.1| 235|Drosophila melanogaster GM27569p
protein.
Length = 235
Score = 200 bits (488), Expect = 2e-51
Identities = 96/193 (49%), Positives = 129/193 (66%)
Frame = -2
Query: 659 IFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAPACGKARLLFEK 480
IFS++QK +D EQE+RE IR + +E++ +S+EA LQ+IH + + I+ ACG AR E
Sbjct: 9 IFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVEL 68
Query: 479 AHDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSP 300
Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+AE+LG+
Sbjct: 69 CAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLK- 127
Query: 299 VELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFXXXXX 120
+ EGFHLD+EDYL+G+L + SELSR A NSVT GDYERPL IS F+ +LN GF
Sbjct: 128 ISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNL 187
Query: 119 XXXXXXXRFDATK 81
RFDA K
Sbjct: 188 KNDGLRKRFDALK 200
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3
Query: 85 LKYDVKKXEEGGYEXSIQGAAA 20
LKYDVKK EE Y+ SI+G ++
Sbjct: 199 LKYDVKKIEEVVYDVSIRGLSS 220
>AE013599-1113|AAF58784.1| 235|Drosophila melanogaster CG11761-PA
protein.
Length = 235
Score = 200 bits (488), Expect = 2e-51
Identities = 96/193 (49%), Positives = 129/193 (66%)
Frame = -2
Query: 659 IFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGIAPACGKARLLFEK 480
IFS++QK +D EQE+RE IR + +E++ +S+EA LQ+IH + + I+ ACG AR E
Sbjct: 9 IFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVEL 68
Query: 479 AHDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSP 300
Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + ET+AE+LG+
Sbjct: 69 CAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLK- 127
Query: 299 VELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFXXXXX 120
+ EGFHLD+EDYL+G+L + SELSR A NSVT GDYERPL IS F+ +LN GF
Sbjct: 128 ISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNL 187
Query: 119 XXXXXXXRFDATK 81
RFDA K
Sbjct: 188 KNDGLRKRFDALK 200
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3
Query: 85 LKYDVKKXEEGGYEXSIQGAAA 20
LKYDVKK EE Y+ SI+G ++
Sbjct: 199 LKYDVKKIEEVVYDVSIRGLSS 220
>AY392453-1|AAQ84213.1| 89|Drosophila melanogaster translin
protein.
Length = 89
Score = 99.5 bits (237), Expect = 4e-21
Identities = 44/89 (49%), Positives = 60/89 (67%)
Frame = -2
Query: 509 CGKARLLFEKAHDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHE 330
CG AR E Y +L + VP Y++Y DHW F+TQR ++IAL I+LE G L + E
Sbjct: 1 CGLARKQVELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRE 60
Query: 329 TMAEILGVSPVELKEGFHLDIEDYLIGLL 243
T+AE+LG+ + EGFHLD+EDYL+G+L
Sbjct: 61 TVAEMLGLK-ISQSEGFHLDVEDYLLGIL 88
>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p
protein.
Length = 1190
Score = 35.9 bits (79), Expect = 0.062
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = -2
Query: 728 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 555
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 722 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 778
Query: 554 VLQVIHYNEAGIAPACG 504
+++ EA +A A G
Sbjct: 779 QAKIVDI-EAKLADAKG 794
>AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p
protein.
Length = 985
Score = 35.9 bits (79), Expect = 0.062
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = -2
Query: 728 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 555
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 517 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 573
Query: 554 VLQVIHYNEAGIAPACG 504
+++ EA +A A G
Sbjct: 574 QAKIVDI-EAKLADAKG 589
>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
Length = 1179
Score = 35.9 bits (79), Expect = 0.062
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = -2
Query: 728 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 555
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 711 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 767
Query: 554 VLQVIHYNEAGIAPACG 504
+++ EA +A A G
Sbjct: 768 QAKIVDI-EAKLADAKG 783
>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
protein.
Length = 1179
Score = 35.9 bits (79), Expect = 0.062
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = -2
Query: 728 NKIKEPRLLIKH-VKMCDNELINKIFSDFQKNLDQEQELRETIRTICKE-VDQISREATT 555
NK+KE L +H + MC+N L + FQ+N + +E+RE ++T+ ++ +D ++ T+
Sbjct: 711 NKMKENLDLRQHELTMCENRLAQ---TTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTS 767
Query: 554 VLQVIHYNEAGIAPACG 504
+++ EA +A A G
Sbjct: 768 QAKIVDI-EAKLADAKG 783
>DQ448818-1|ABE01846.1| 298|Drosophila melanogaster Trax protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 281 FHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGF 135
F +D +Y++GL + EL R +NS+ GD + L K + +G+
Sbjct: 191 FFVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGY 239
>AY047514-1|AAK77246.1| 258|Drosophila melanogaster GH01922p
protein.
Length = 258
Score = 32.3 bits (70), Expect = 0.76
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = -2
Query: 281 FHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFXXXXXXXXXXX 102
F +D +Y++GL + EL R +NS+ GD + L K + +G
Sbjct: 191 FFVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGLVSSPLRNSINF 250
Query: 101 XRFDATKV 78
F T V
Sbjct: 251 LLFSVTSV 258
>AE014297-2027|AAF55183.2| 258|Drosophila melanogaster CG5063-PA,
isoform A protein.
Length = 258
Score = 32.3 bits (70), Expect = 0.76
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = -2
Query: 281 FHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFXXXXXXXXXXX 102
F +D +Y++GL + EL R +NS+ GD + L K + +G
Sbjct: 191 FFVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGLVSSPLRNSINF 250
Query: 101 XRFDATKV 78
F T V
Sbjct: 251 LLFSVTSV 258
>AE014297-2026|AAN13659.1| 292|Drosophila melanogaster CG5063-PB,
isoform B protein.
Length = 292
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 281 FHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAG 138
F +D +Y++GL + EL R +NS+ GD + L K + +G
Sbjct: 191 FFVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSG 238
>AL138972-4|CAB72287.1| 435|Drosophila melanogaster EG:BACR25B3.2
protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -2
Query: 689 KMCDNELINKIFSDFQKNLDQEQELRETIRTI 594
K+ D++L N S+++ N D+EQE+R T+ +
Sbjct: 194 KLLDDDLRNFFHSNYEGNDDEEQEIRSTLERV 225
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -2
Query: 689 KMCDNELINKIFSDFQKNLDQEQELRETIRTI 594
K+ D++L N S+++ N D+EQE+R T+ +
Sbjct: 253 KLLDDDLRNFFHSNYEGNDDEEQEIRSTLERV 284
>AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p
protein.
Length = 359
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 725 KIKEPRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 600
+IKE L IK K+C N ++ F ++ +QE LRE +R
Sbjct: 156 EIKEDILPIKKKKICKNPDVDTSFLPDREREEQENRLREQLR 197
>AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-PA
protein.
Length = 359
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 725 KIKEPRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 600
+IKE L IK K+C N ++ F ++ +QE LRE +R
Sbjct: 156 EIKEDILPIKKKKICKNPDVDTSFLPDREREEQENRLREQLR 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,039,700
Number of Sequences: 53049
Number of extensions: 620912
Number of successful extensions: 1689
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -