Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_K08
(781 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 94 2e-20
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 79 9e-16
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 76 5e-15
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 44 2e-05
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 35 0.015
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 31 0.24
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 31 0.24
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 29 0.75
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 27 2.3
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 27 3.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 5.3
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 94.3 bits (224), Expect = 2e-20
Identities = 49/127 (38%), Positives = 75/127 (59%)
Frame = -1
Query: 781 FDSRGDGKIHVAQIGDALRAXGXNPTESDVXKCTLHLKPDERISFEVFLPIYQAISKARS 602
FD G G+I IGD LRA G NPT +++ + L P E + E FL + +
Sbjct: 15 FDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTL-PAE-VDMEQFLQVLNRPNGFDM 72
Query: 601 GDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYE 422
+F++G + FDKD G I ELR++L++LGEKLS++E+++LL+G G +NY
Sbjct: 73 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMVNYH 132
Query: 421 NFVHLIM 401
+FV +I+
Sbjct: 133 DFVQMIL 139
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 78.6 bits (185), Expect = 9e-16
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Frame = -1
Query: 781 FDSRGDGKIHVAQIGDALRAXGXNPTESDVXKCTLHLKPDER--ISFEVFLPIYQAISKA 608
FD DG I ++G +R+ G +PT +++ + D I F FL + K
Sbjct: 21 FDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMAR--KM 78
Query: 607 RSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLL-QGQEDSQGNI 431
+ D + E + FDKDGNG+I+ EL H+L++LGE+LS +EV ++ + D G I
Sbjct: 79 KDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVI 138
Query: 430 NYENFVHLI 404
NYE F +I
Sbjct: 139 NYEEFSRVI 147
Score = 33.9 bits (74), Expect = 0.026
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -1
Query: 586 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLL-QGQEDSQGNINYENFVH 410
+F E FD+D +G I+S EL ++ +LG+ + E++ ++ + D G I++ F+
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLT 72
Query: 409 LI 404
++
Sbjct: 73 MM 74
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 76.2 bits (179), Expect = 5e-15
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Frame = -1
Query: 781 FDSRGDGKIHVAQIGDALRAXGXNPTESDVXKCTLHLKPDERISFEVFLPIYQAISKARS 602
+D DG I + +G LR+ G N T++++ K + L + I + F+ +K R
Sbjct: 18 YDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL--GDAIDEKKFMSFVS--NKLRE 73
Query: 601 GDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQ-GQEDSQGNINY 425
++ ++I+ R FDKD +G+I +A+ + TLGEKLSD+EV+ ++Q + G+ +Y
Sbjct: 74 TESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDY 133
Query: 424 ENFVHLIM 401
+FV IM
Sbjct: 134 YDFVQRIM 141
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 44.4 bits (100), Expect = 2e-05
Identities = 34/125 (27%), Positives = 54/125 (43%)
Frame = -1
Query: 778 DSRGDGKIHVAQIGDALRAXGXNPTESDVXKCTLHLKPDERISFEVFLPIYQAISKARSG 599
D GDG I + L + + +E + + P I+ FL ++ S
Sbjct: 58 DKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESINPP--INLAAFLTAMGSMLCRIS- 114
Query: 598 DTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYEN 419
ND +E FD +G I + +R LS++G+++ EVE +L+ S G YE
Sbjct: 115 -PRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSY-TSHGVFYYEK 172
Query: 418 FVHLI 404
FV I
Sbjct: 173 FVDAI 177
Score = 29.9 bits (64), Expect = 0.43
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 577 EGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQ 458
E DKDG+G I +++ +L++L + S+D + + +
Sbjct: 52 EAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFE 91
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 34.7 bits (76), Expect = 0.015
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 568 RHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVHLIMQ 398
RHF+K + ++ E L++LG +E L +S+ + YE F ++M+
Sbjct: 494 RHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSEEGVTYERFTEIVME 550
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 30.7 bits (66), Expect = 0.24
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 586 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQG-QEDSQGNINYENFVH 410
D E + FD D + I ELR + LG EV ++L+ + +G + E+FV
Sbjct: 38 DINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVR 97
Query: 409 LIMQ 398
++ +
Sbjct: 98 VMTE 101
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 589 NDFIEGLRHFDKDGNGFISSAE-LRHLLSTLGEKLSDDEVEQLLQ-GQEDSQGNINYEN 419
++ ++ LR FDK G G++ + +R + + E+ +E+++ + +D G I+ N
Sbjct: 73 SEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRN 131
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -1
Query: 562 FDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVHL 407
FD G+I +LR + LGE L+ +++ QL+ + G ++ E F L
Sbjct: 21 FDVTHKGYIDFEDLRRSCAQLGENLTKEQL-QLMLDLAGTNGKVSREEFAEL 71
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 29.1 bits (62), Expect = 0.75
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 470 LYLIITKLLSESREQVSQFRRRDEPIAIFVKMAQTLNKVISSVATACFRYGLVNWQK 640
L+L+ L++ +Q + R + IAIF K + +K I SVA R+ L QK
Sbjct: 1377 LHLLFASLVAHKFDQPQHAQTRTKIIAIFFKDLYSPHKEIYSVAIDALRHVLSQNQK 1433
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = -1
Query: 646 EVFLPIYQAISKARSGDTANDFI--EGLRHFDKDGNGFISS-AELRHLLSTLGEK-LSDD 479
++F+ + I+K +G + I + RH DK GN F ++ EL +L +G+K L++
Sbjct: 643 DIFMSVTD-ITKIENGTKIYEEILQDCCRHIDKSGNEFTTAYLELLEVLLKVGQKYLAES 701
Query: 478 EVEQLL 461
+E +L
Sbjct: 702 LLEHIL 707
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -1
Query: 538 ISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVHLIMQG 395
I A++ LLSTL E D ++EQ+ Q + + Y +F+ ++QG
Sbjct: 42 IVKAQILFLLSTLREDQYDTKLEQIRQLINKNAPRV-YHHFLRRLIQG 88
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 302 LTVSHYGSNCMVTDLVSLQIKVLQQMMT*NSALHDEVNKVLIVDISLRVFLSLQELLYLI 481
L S+Y ++ D V Q+K L Q +S + + + + RV S+ + L+L+
Sbjct: 539 LETSYYNCMTVLEDEVIAQLKSLLQYSKTSSQMFTTLMRFQPLFFRTRVRTSISDCLHLL 598
Query: 482 ITKLLSE 502
+ ++ E
Sbjct: 599 VNRIKQE 605
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,003,859
Number of Sequences: 5004
Number of extensions: 60286
Number of successful extensions: 168
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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