Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_K07
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104758-1|AAI04759.1|  465|Homo sapiens trinucleotide repeat co...    32   1.9  
BC052491-1|AAH52491.1|  464|Homo sapiens trinucleotide repeat co...    32   1.9  
AY165003-1|AAN73884.1|  465|Homo sapiens CUG-BP and ETR-3 like f...    32   1.9  
AL589765-4|CAI17167.1|  415|Homo sapiens trinucleotide repeat co...    32   1.9  
AL589765-3|CAI17166.1|  465|Homo sapiens trinucleotide repeat co...    32   1.9  
AF329264-1|AAK07474.1|  462|Homo sapiens CUG-BP and ETR-3 like f...    32   1.9  
AB209264-1|BAD92501.1|  441|Homo sapiens trinucleotide repeat co...    32   1.9  

>BC104758-1|AAI04759.1|  465|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 465

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 681 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 505
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>BC052491-1|AAH52491.1|  464|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 681 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 505
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AY165003-1|AAN73884.1|  465|Homo sapiens CUG-BP and ETR-3 like
           factor 3 protein.
          Length = 465

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 681 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 505
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AL589765-4|CAI17167.1|  415|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 415

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 681 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 505
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AL589765-3|CAI17166.1|  465|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 465

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 681 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 505
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AF329264-1|AAK07474.1|  462|Homo sapiens CUG-BP and ETR-3 like
           factor 3 protein.
          Length = 462

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 681 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 505
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AB209264-1|BAD92501.1|  441|Homo sapiens trinucleotide repeat
           containing 4 variant protein.
          Length = 441

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 681 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 505
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 60  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,843,950
Number of Sequences: 237096
Number of extensions: 1880600
Number of successful extensions: 2785
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2785
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)