Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_K07
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF016450-13|AAB65988.2|  472|Caenorhabditis elegans Hypothetical...    28   8.1  

>U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical
           protein C09F5.1 protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 36/153 (23%), Positives = 52/153 (33%), Gaps = 4/153 (2%)
 Frame = -2

Query: 747 NVSRQP--LHNIEXMGKVVSAGPTKPNEPTKKGETKKSFLSNTGKAIQSTP--SRKVFTP 580
           +VSR+P  LH     G+ +   P         G T  SFL+ +G +  S P   R   T 
Sbjct: 62  DVSREPSFLHTSANYGQHIETSPPPVQRYNVSGATNSSFLNTSGDSRVSYPGADRSNDTT 121

Query: 579 RAVNVGSLIYTDEDGDKGCTFEEIEFTKPKHYDNYQRDLFDFIPLSEPCHLKQLXXXXXX 400
              N G  I+     D G    E   + P    +    + + I                 
Sbjct: 122 VINNYGYDIHEVRTDDGGARIIETHGSGPLRETSRIEHVEETITRPSAMRSSSAAAQRSS 181

Query: 399 XXXXXRHSMELECSYQDEFYTDDFSNESLPEED 301
                  +     SY+ EF +D   NESL  +D
Sbjct: 182 SNIFTVPAPAAHVSYRQEFASD---NESLARKD 211


>AF016450-13|AAB65988.2|  472|Caenorhabditis elegans Hypothetical
           protein B0238.9 protein.
          Length = 472

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 622 ESNSEHTIT*SVHPSCCECGFSHIY 548
           E+N ++      HPS CEC F H Y
Sbjct: 225 ETNGQYDNNQEPHPSNCECVFHHDY 249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,610,035
Number of Sequences: 27780
Number of extensions: 307425
Number of successful extensions: 763
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)