Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_K06
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122...    31   0.97 
03_04_0247 - 19331253-19331293,19331438-19331621                       30   1.7  
07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342           30   2.2  
02_05_0482 + 29382696-29383251,29383376-29383692                       29   2.9  
06_03_0722 - 23869981-23870250                                         29   3.9  
05_01_0188 - 1357074-1357098,1357811-1357941,1358572-1358667,135...    29   3.9  
03_05_0923 + 28848925-28849272,28849636-28849869,28849965-288501...    29   5.2  
08_02_0707 - 20212190-20214592                                         28   6.8  

>01_01_0134 -
           1224084-1224269,1224578-1224662,1224763-1225050,
           1225114-1225334,1225511-1225642,1226218-1226494,
           1226722-1226770,1226993-1227088,1227779-1227911,
           1228241-1228391,1228484-1228674,1229167-1229382
          Length = 674

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -1

Query: 398 GSTWRPKISKRSTTKHKNGLYRFF 327
           GS + PK+ ++STTKH+ G +R F
Sbjct: 338 GSEFSPKLIQKSTTKHRRGWWRQF 361


>03_04_0247 - 19331253-19331293,19331438-19331621
          Length = 74

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 36 GCTCGLCGAEVGGVSRRCSR 95
          GCTC LC + +  +SRR +R
Sbjct: 13 GCTCNLCASALSAISRRSAR 32


>07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342
          Length = 287

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/31 (58%), Positives = 19/31 (61%)
 Frame = +3

Query: 15  MSMEGAWGCTCGLCGAEVGGVSRRCSRAHVH 107
           MSM  A G  CGLCGA+ GG    CSR H H
Sbjct: 31  MSMGPAAGEGCGLCGADGGGC---CSR-HRH 57


>02_05_0482 + 29382696-29383251,29383376-29383692
          Length = 290

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 386 ARSNLGGKVPKPSARAGRERWGAG 457
           +R  LG K P P  R G+ER G G
Sbjct: 39  SRKRLGAKPPSPQRRGGQEREGGG 62


>06_03_0722 - 23869981-23870250
          Length = 89

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 137 MYRECERVRRMHVRARAPPRHAPHLRTAQPARATPR 30
           MYR C  +  +H R R  PR      T+    +TP+
Sbjct: 26  MYRRCAAIEELHRRKRRGPRRRSTTGTSSRPSSTPK 61


>05_01_0188 -
           1357074-1357098,1357811-1357941,1358572-1358667,
           1358736-1358769,1358867-1358958,1359273-1359332,
           1359376-1359435,1360016-1360525,1360645-1360719,
           1360809-1361015
          Length = 429

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = +3

Query: 93  RAHVHPTHSLALSIHTPRXINNINKYQQRYKIAFRKNIRSLKCIYFCLAYKKKRIAYLVF 272
           +  +H  +  A+ + T   ++  N Y   +      N+     I F   +K KR+AYL  
Sbjct: 21  KTDLHEDNGQAVDVTTKTVLDPWNPYFPLWPPEIPPNLGLNGAICFIEDWKMKRMAYLAS 80

Query: 273 YSFSLIINS 299
           Y  + +IN+
Sbjct: 81  YRSTCVINA 89


>03_05_0923 +
           28848925-28849272,28849636-28849869,28849965-28850131,
           28850433-28850651,28850743-28850929,28851012-28851063,
           28851158-28851387,28851619-28851717,28851835-28852565,
           28853004-28853519,28854140-28854398
          Length = 1013

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = -1

Query: 191 GYFVTLLIFIYIIYXPWSMY----RECERVRRMHVRARA 87
           G FV  ++  YIIY  WS Y     +C ++  +  RA A
Sbjct: 340 GVFVICMLVGYIIYAAWSRYDNVKEDCRKMEALKKRAEA 378


>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 80 RHAPHLRTAQPARATP 33
          RHAPHLR A P R +P
Sbjct: 4  RHAPHLRLAVPPRLSP 19


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,324,416
Number of Sequences: 37544
Number of extensions: 283559
Number of successful extensions: 1118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)