Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_K06
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 40 0.002
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 40 0.002
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 40 0.002
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.16
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.16
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.16
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 33 0.16
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 0.86
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 0.86
Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 6.1
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 6.1
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = -3
Query: 675 ERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 565
ERM DL++KLQQKIKTYKRQ AK+R+
Sbjct: 1872 ERMYDLIEKLQQKIKTYKRQIEDAESLASGNLAKYRQ 1908
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3
Query: 678 FERMQDLVDKLQQKIKTYKRQ 616
FER+QDL+DKLQQK+KT K+Q
Sbjct: 1870 FERLQDLIDKLQQKLKTQKKQ 1890
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3
Query: 678 FERMQDLVDKLQQKIKTYKRQ 616
FER+QDL+DKLQQK+KT K+Q
Sbjct: 1870 FERLQDLIDKLQQKLKTQKKQ 1890
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3
Query: 678 FERMQDLVDKLQQKIKTYKRQ 616
FER+QDL+DKLQQK+KT K+Q
Sbjct: 1873 FERLQDLIDKLQQKLKTQKKQ 1893
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 678 FERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 565
F+R+Q+ V+KLQQKI+ KRQ +KFR+
Sbjct: 1868 FDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 678 FERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 565
F+R+Q+ V+KLQQKI+ KRQ +KFR+
Sbjct: 1868 FDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 678 FERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 565
F+R+Q+ V+KLQQKI+ KRQ +KFR+
Sbjct: 1868 FDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy chain
protein.
Length = 91
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3
Query: 669 MQDLVDKLQQKIKTYKRQ 616
+QDL+DKLQQK+KT K+Q
Sbjct: 1 LQDLIDKLQQKLKTQKKQ 18
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -3
Query: 675 ERMQDLVDKLQQKIKTYKRQ 616
ER+ +LVDKLQ K+K +KRQ
Sbjct: 1875 ERLTELVDKLQCKLKIFKRQ 1894
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -3
Query: 675 ERMQDLVDKLQQKIKTYKRQ 616
ER+ +LVDKLQ K+K +KRQ
Sbjct: 1875 ERLTELVDKLQCKLKIFKRQ 1894
>Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical
protein F47G4.2 protein.
Length = 710
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 273 KILNMQFFFFCKPNKNIYTLGI 208
K+LN FF FCK N+Y+L I
Sbjct: 148 KLLNPDFFQFCKSFPNLYSLDI 169
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2196 GPTSAREERNDVPPPAPPMRPIITHTSP 2223
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2218 GPTSAREERNDVPPPAPPMRPIITHTSP 2245
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2009 GPTSAREERNDVPPPAPPMRPIITHTSP 2036
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2316 GPTSAREERNDVPPPAPPMRPIITHTSP 2343
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2196 GPTSAREERNDVPPPAPPMRPIITHTSP 2223
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2218 GPTSAREERNDVPPPAPPMRPIITHTSP 2245
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2009 GPTSAREERNDVPPPAPPMRPIITHTSP 2036
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2316 GPTSAREERNDVPPPAPPMRPIITHTSP 2343
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 2027 GPTSAREERNDVPPPAPPMRPIITHTSP 2054
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 109 GCTCAREHRRDTPPTSAPHNPHVQPHAP 26
G T ARE R D PP + P P + +P
Sbjct: 1991 GPTSAREERNDVPPPAPPMRPIITHTSP 2018
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,193,362
Number of Sequences: 27780
Number of extensions: 251487
Number of successful extensions: 859
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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