Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_K05
         (820 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426...    26   3.7  
12_02_0550 + 20328666-20328870,20329116-20329200,20329285-203293...    29   4.4  
02_02_0223 - 8021040-8021247,8022275-8022367,8022808-8023059,802...    29   5.9  

>06_01_0591 +
           4261483-4261631,4261837-4262007,4262127-4262226,
           4263151-4263315,4263416-4263544,4263758-4263858,
           4264527-4264596,4265080-4265331,4265828-4265897,
           4266281-4266341,4266916-4267003,4267746-4267830,
           4268168-4268234,4268442-4268559,4268843-4268923,
           4269022-4269267,4269670-4269771,4269847-4269914,
           4270040-4270171,4270283-4270430,4270504-4270790,
           4270920-4271067,4271156-4271331,4271407-4271518,
           4271614-4271667,4273134-4273244,4273317-4273478,
           4273627-4273814,4273948-4274137,4274297-4274464,
           4274832-4274912
          Length = 1359

 Score = 25.8 bits (54), Expect(2) = 3.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 368 IISTRRLCEY*HAIQRSSSYLIFNYTLISHC 460
           +IS+RRL +Y  + ++ SS +  +  L+ HC
Sbjct: 571 VISSRRLSKYLSSPEKRSSAIPVSADLLKHC 601



 Score = 21.8 bits (44), Expect(2) = 3.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 281 KQYQYAVQNIGCSCYIFAHYIDATLKSIEIISTRRLCE 394
           K  ++  + I C+  + AH     + S E + T+RL E
Sbjct: 495 KMMKHKDERISCAGELLAHIRTVKMYSWERLFTQRLVE 532


>12_02_0550 +
           20328666-20328870,20329116-20329200,20329285-20329389,
           20331435-20331468,20331552-20331737
          Length = 204

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +2

Query: 257 FTEMNFDYKQYQYAVQNIGCSCYIFAHYIDA--TLKSIEIISTRRLCEY*HAIQRS 418
           FT+++  Y+  +  V  +G  C +   Y+DA  T +SIE +   R+C+  H +  S
Sbjct: 75  FTDIHAIYRWEKMDVNFVGAWCLL--QYMDAEKTKQSIEYLDPTRICQTQHTVTLS 128


>02_02_0223 -
           8021040-8021247,8022275-8022367,8022808-8023059,
           8023143-8023597,8023667-8023983,8024019-8024298,
           8024423-8024728,8024762-8025130,8025216-8025455
          Length = 839

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +2

Query: 245 MYVYFTEMNFDYKQYQYAVQNIGCSCYIFAHYIDATLKS--IEIISTRRLCEY*HAIQ 412
           +++ F++++  Y+Q +  V  +G  C +  HY+DA  K   I  +   R+C+  H ++
Sbjct: 630 VWLDFSDLHAIYRQDKMDVNYVGIWCMM--HYMDAKKKKEPIGFLDPTRICQTQHTVR 685


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,464,263
Number of Sequences: 37544
Number of extensions: 285649
Number of successful extensions: 464
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)