BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_K04
(865 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 147 4e-37
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 25 3.0
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 25 3.0
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 24 6.9
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 24 6.9
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 24 6.9
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 24 6.9
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 24 6.9
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 24 6.9
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 24 6.9
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 24 6.9
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 24 6.9
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 24 6.9
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 24 6.9
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 24 6.9
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 24 6.9
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 24 6.9
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 23 9.1
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 147 bits (356), Expect = 4e-37
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = -1
Query: 820 IDNPDYKGVWAPXQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGT 641
IDNP+YKG W P QIDNPAYKG WVHPEIDNPEY D +LY R+E+CAVG+D+WQVKSGT
Sbjct: 263 IDNPEYKGEWKPKQIDNPAYKGVWVHPEIDNPEYEEDKSLYLREEVCAVGIDVWQVKSGT 322
Query: 640 IFDDFLITDDPAAAKERGEVIKKRQEGEKKM 548
IFD+F+IT+D AK+ +K+ QEGEKK+
Sbjct: 323 IFDNFMITNDLEEAKKVAASVKETQEGEKKV 353
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 25.0 bits (52), Expect = 3.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 682 RFRRACTGLNQECTLGCRFRDGPMGLCKL 768
R RR C L E L R P+ +C+L
Sbjct: 404 RIRRGCNTLPNEMVLDSRTASTPVEICEL 432
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 25.0 bits (52), Expect = 3.0
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 349 SPRTHTTYPEVLNVLALTN*SQQPTAHRVPPQALRLQSHRRGPHHLPH 492
+P H + P + +T+ + P AH P A S GP HL H
Sbjct: 182 APIAHYSAPIAHHAAPITHYAA-PIAHHAAPIAHSTSSIVHGPSHLSH 228
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 657 CHKSRPTAQISSRLYRFESGVYSGLSISG 743
C K T +I +L +FES S L++ G
Sbjct: 491 CAKQSETTRIEKQLEQFESAPRSKLAVYG 519
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 23.8 bits (49), Expect = 6.9
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 412 QQPTAHRVPPQALRLQSHRRGPHHLP 489
QQ H+ PQ Q + PHH P
Sbjct: 309 QQHHHHQHQPQQQHQQQYHSHPHHTP 334
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 205 PIAHHAAPIAHSTSSIVHGPSHLSH 229
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 207 PIAHHAAPIAHSTSSIVHGPSHLSH 231
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 212 PIAHHAAPIAHSTSSIVHGPSHLSH 236
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 212 PIAHHAAPIAHSTSSIVHGPSHLSH 236
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 236 PIAHHAAPIAHSTSSIVHGPSHLSH 260
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 205 PIAHHAAPIAHSTSSIVHGPSHLSH 229
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 204 PIAHHAAPIAHSTSSIVHGPSHLSH 228
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 418 PTAHRVPPQALRLQSHRRGPHHLPH 492
P AH P A S GP HL H
Sbjct: 212 PIAHHAAPIAHSTSSIVHGPSHLSH 236
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 23.4 bits (48), Expect = 9.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 97 LYIHVPAHGARPITKH*IITYINSERNPHLHGH 195
L ++VP +G H +I +I+ N +L GH
Sbjct: 354 LSVNVPYYGNYHSLGHVLIGFIHDPDNLYLEGH 386
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,976
Number of Sequences: 2352
Number of extensions: 17636
Number of successful extensions: 95
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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