Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_J23
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 242 3e-64
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 242 3e-64
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 242 3e-64
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 32 0.45
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 1.0
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 1.0
Z83122-2|CAB05599.1| 155|Caenorhabditis elegans Hypothetical pr... 31 1.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.8
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 2.4
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 2.4
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 3.2
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 29 4.2
AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. 29 4.2
AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical ... 29 4.2
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 29 4.2
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 5.5
AF016415-5|AAW88414.1| 305|Caenorhabditis elegans Serpentine re... 29 5.5
Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 9.7
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 242 bits (592), Expect = 3e-64
Identities = 107/159 (67%), Positives = 125/159 (78%), Gaps = 1/159 (0%)
Frame = -3
Query: 770 DPFDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFM 594
DPF MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FM
Sbjct: 208 DPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFM 267
Query: 593 SCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESY 414
SCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY
Sbjct: 268 SCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESY 327
Query: 413 DWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 297
W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 328 TWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 365
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 242 bits (592), Expect = 3e-64
Identities = 107/159 (67%), Positives = 125/159 (78%), Gaps = 1/159 (0%)
Frame = -3
Query: 770 DPFDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFM 594
DPF MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FM
Sbjct: 216 DPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFM 275
Query: 593 SCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESY 414
SCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY
Sbjct: 276 SCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESY 335
Query: 413 DWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 297
W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 336 TWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 373
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 242 bits (592), Expect = 3e-64
Identities = 107/159 (67%), Positives = 125/159 (78%), Gaps = 1/159 (0%)
Frame = -3
Query: 770 DPFDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFM 594
DPF MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FM
Sbjct: 241 DPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFM 300
Query: 593 SCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESY 414
SCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY
Sbjct: 301 SCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESY 360
Query: 413 DWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 297
W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 361 TWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -3
Query: 731 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMSCNLITGMFQRLD 555
D+ V+ N+ + K P + KF PENY +W Y +E ++ ++S + ++ +
Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRTEFSKLYAG-N 99
Query: 554 KMRKQAFASVCLFGEDNNSTIS 489
+RK A+ + E+ N +++
Sbjct: 100 VVRKVEDATHIVLPENENGSVT 121
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 460 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 570
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 460 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 570
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>Z83122-2|CAB05599.1| 155|Caenorhabditis elegans Hypothetical
protein R11A5.3 protein.
Length = 155
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = -1
Query: 847 RSNPKKKEEVVPDLKXRSLKSLRSPRTPSTLCLKVPSTWMISSVSTPTKTK 695
++ K +++++ + RS+K P TP T ++ ST +++STP + K
Sbjct: 74 KTTKKDRKKIIQTPRRRSIKLANVPMTPKTAPIRRHSTGGNAAMSTPKRRK 124
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 452 PLSSDWQVDYESYDWKKL 399
PL D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 457 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 570
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 457 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 570
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 361 TTSRGTEPTKTVESSTRARYSSECRPTSS 275
TT+ T PT T E ST A+ S+ +PT++
Sbjct: 218 TTTTSTFPTSTTEKSTTAQPSTTTKPTTT 246
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 294 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 202
N D + +Y F+T N K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein.
Length = 167
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -1
Query: 853 KERSNPKKKEEVVPDLKXRSLKSLRSPRTPSTLCLKVPSTWMISSVSTPTKTKLNLFLTS 674
K++ PKKK + + +SLKS +S TP +P S PT+ T
Sbjct: 52 KQQKQPKKKTKKSTKSRSKSLKSKQSAVTPKKRASPIPPQPAPPSSPKPTEES----ATP 107
Query: 673 GRSLTPRTIP 644
S P T P
Sbjct: 108 SSSFAPSTEP 117
>AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical
protein T06A4.2 protein.
Length = 167
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -1
Query: 853 KERSNPKKKEEVVPDLKXRSLKSLRSPRTPSTLCLKVPSTWMISSVSTPTKTKLNLFLTS 674
K++ PKKK + + +SLKS +S TP +P S PT+ T
Sbjct: 52 KQQKQPKKKTKKSTKSRSKSLKSKQSAVTPKKRASPIPPQPAPPSSPKPTEES----ATP 107
Query: 673 GRSLTPRTIP 644
S P T P
Sbjct: 108 SSSFAPSTEP 117
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 294 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 202
N D + +Y F+T N K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 484 CGCGAERSSCSRCRLIGRWTTSPTTG 407
C C + + CRL+ W+ TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721
>AF016415-5|AAW88414.1| 305|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 30 protein.
Length = 305
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 48 GTTLNKCKYYHFFMQRRVVF 107
G +NKC Y +F +QR +VF
Sbjct: 171 GCAINKCFYNYFMLQRSIVF 190
>Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical
protein F58E6.3 protein.
Length = 293
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -1
Query: 361 TTSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK*VDVGNFRN 182
T +G K E + + + S+ + CI + N+KK+Y + KCK VGN +
Sbjct: 197 TYQQGANTAKMCEWTNQCKASTHNCHWLAACIDLPDENHKKMY---SCKCKPGFVGNGFH 253
Query: 181 C 179
C
Sbjct: 254 C 254
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 9.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 701 DEAKSIPYFWEKFDPENYSIWYAEY 627
D+ + +P WE+ D +NY +Y ++
Sbjct: 327 DDPRELPPGWEQVDDQNYGTFYVDH 351
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 553 KCANRLSHPSACLVKTTIPPSLECGCGAERSSCSRCRLIGRWTTSPTTG 407
KC+ + + + +P + CGC A S + CR R T S + G
Sbjct: 4 KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 358 TSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK 209
T + TE T TVE++ R ++Q SYN K KK KCK
Sbjct: 334 TKKVTEETTTVETTERQNVDDTTENQTTQTTSSSYN--AKEEKKSYRKCK 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,066,181
Number of Sequences: 27780
Number of extensions: 460419
Number of successful extensions: 1715
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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