Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_J19
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023506-1|AAH23506.1|  222|Homo sapiens chromosome X open readi...   258   2e-68
AK026618-1|BAB15510.1|  222|Homo sapiens NA.  protein.                258   2e-68
AC004000-2|AAB96348.1|   81|Homo sapiens WUGSC:H_DJ404F18.2 prot...    86   1e-16
BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing ...    31   3.3  

>BC023506-1|AAH23506.1|  222|Homo sapiens chromosome X open reading
           frame 56 protein.
          Length = 222

 Score =  258 bits (632), Expect = 2e-68
 Identities = 132/220 (60%), Positives = 167/220 (75%), Gaps = 6/220 (2%)
 Frame = -2

Query: 645 MPKVVSRSIVCSDTKDQEEYNE-TKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVID 469
           MPKVVSRS+VCSDT+D+EEY++  KPLH+YYCLCGQM L+LDC ++KLP+RP D +RVID
Sbjct: 1   MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVID 60

Query: 468 GSKHAHKITSDPDE-TVYLRREKGIERQYRLKCKKCALPIYYKHD-QESNVAFIIDGALV 295
            +KHAHK  +  DE T+YLRR +GIERQYR KC KC LP++Y+   + + V FI+DGA+V
Sbjct: 61  AAKHAHKFCNTEDEETMYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVV 120

Query: 294 QTPGEG-GVTDIYKQVALTQPKKIMVTKHTKNMGKFSSVTVSTXXXXXXXXEAREVADSY 118
           +  G+G G T+IY Q     PKK+M+TK TK+MGKFSSVTVST        EAREVADSY
Sbjct: 121 KF-GQGFGKTNIYTQKQ-EPPKKVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSY 178

Query: 117 ANNARIIEKQLERKGMNKRQAETPAHTLEKRP--RGTXID 4
           A NA++IEKQLERKGM+KR+ +  A    K+   +GT ID
Sbjct: 179 AQNAKVIEKQLERKGMSKRRLQELAELEAKKAKMKGTLID 218


>AK026618-1|BAB15510.1|  222|Homo sapiens NA.  protein.
          Length = 222

 Score =  258 bits (632), Expect = 2e-68
 Identities = 132/220 (60%), Positives = 167/220 (75%), Gaps = 6/220 (2%)
 Frame = -2

Query: 645 MPKVVSRSIVCSDTKDQEEYNE-TKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVID 469
           MPKVVSRS+VCSDT+D+EEY++  KPLH+YYCLCGQM L+LDC ++KLP+RP D +RVID
Sbjct: 1   MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVID 60

Query: 468 GSKHAHKITSDPDE-TVYLRREKGIERQYRLKCKKCALPIYYKHD-QESNVAFIIDGALV 295
            +KHAHK  +  DE T+YLRR +GIERQYR KC KC LP++Y+   + + V FI+DGA+V
Sbjct: 61  AAKHAHKFCNTEDEETMYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVV 120

Query: 294 QTPGEG-GVTDIYKQVALTQPKKIMVTKHTKNMGKFSSVTVSTXXXXXXXXEAREVADSY 118
           +  G+G G T+IY Q     PKK+M+TK TK+MGKFSSVTVST        EAREVADSY
Sbjct: 121 KF-GQGFGKTNIYTQKQ-EPPKKVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSY 178

Query: 117 ANNARIIEKQLERKGMNKRQAETPAHTLEKRP--RGTXID 4
           A NA++IEKQLERKGM+KR+ +  A    K+   +GT ID
Sbjct: 179 AQNAKVIEKQLERKGMSKRRLQELAELEAKKAKMKGTLID 218


>AC004000-2|AAB96348.1|   81|Homo sapiens WUGSC:H_DJ404F18.2
           protein.
          Length = 81

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
 Frame = -2

Query: 228 IMVTKHTKNMGKFSSVTVSTXXXXXXXXEAREVADSYANNARIIEKQLERKGMNKRQAET 49
           +M+TK TK+MGKFSSVTVST        EAREVADSYA NA++IEKQLERKGM+KR+ + 
Sbjct: 1   VMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQE 60

Query: 48  PAHTLEKRP--RGTXID 4
            A    K+   +GT ID
Sbjct: 61  LAELEAKKAKMKGTLID 77


>BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing 4
           protein.
          Length = 979

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
 Frame = -2

Query: 438 DPDETVYLRREKGIERQYRLKCKKCALPIYYKHDQESNVAFIIDGALVQTPGEGGVTDIY 259
           + +ET     +  I      K  +  LP+YY+       A  ++      PG     DI+
Sbjct: 216 EAEETAEFEDQSVILPPQEKKKPELLLPVYYRLPSYFQQAETVE----IMPGNKSTEDIH 271

Query: 258 KQVALTQPK-KIMVTKHTKNMGKFSSVTVSTXXXXXXXXEAREVADSYANNARIIEKQLE 82
           ++ +L+QP+ +    + T   GKF+  T +T        E + +    A   +I+ + L 
Sbjct: 272 EKTSLSQPQTQSYFRQVTPRAGKFAYSTDNTFEQEIYFDEVQIIHQIGAKRDQIVLENLN 331

Query: 81  R--KGMNKRQAETP 46
           R  K ++K   ETP
Sbjct: 332 RYNKQLSKVFPETP 345


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,528,522
Number of Sequences: 237096
Number of extensions: 2214082
Number of successful extensions: 4048
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4040
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)