Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_J19
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical ...   145   3e-35
AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine re...    33   0.16 
Z70781-1|CAA94835.1|  358|Caenorhabditis elegans Hypothetical pr...    31   0.66 
CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z32679-3|CAA83596.1|  401|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical ...    28   6.1  

>AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical
           protein Y66D12A.8 protein.
          Length = 244

 Score =  145 bits (351), Expect = 3e-35
 Identities = 78/191 (40%), Positives = 113/191 (59%), Gaps = 3/191 (1%)
 Frame = -2

Query: 609 DTKDQEEYNETKPLHIYYCLCGQMSLILDCTIDKLPLRPFDSARVIDGSKHAHKITSDPD 430
           D  D+EEY   KPL+ YYC CG+M++I D  I+++P R  D ARVI   +   K  + P 
Sbjct: 29  DVDDREEYF-VKPLYTYYCTCGEMAMISDTLINRMPKRERDGARVITPDRTTAKTFAKPG 87

Query: 429 ETVYLRREK--GIERQYRLKCKKCALPIYYKHDQESNVAFIIDGALVQTPGEGGVTDIYK 256
           ETVY++R    G+E+QYR  CKKC++P++Y+H    N  FI+  AL+     GG +   +
Sbjct: 88  ETVYVKRSPAVGLEQQYRKMCKKCSIPLFYQHPSALNRTFILADALLSAQEVGGFSANNE 147

Query: 255 QVALTQPKKIMVTKHTKNMGKFSSVTVST-XXXXXXXXEAREVADSYANNARIIEKQLER 79
           +    + KK+++ ++ KN GK  SVTVST         EARE A+SY  NARI+   L+R
Sbjct: 148 E---QRAKKVIMKRNVKNQGKMGSVTVSTMEGEEEEEMEARETAESYTMNARIVHDALKR 204

Query: 78  KGMNKRQAETP 46
           KG+   +   P
Sbjct: 205 KGIGSGKFAVP 215


>AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine
           receptor, class x protein6 protein.
          Length = 293

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +1

Query: 115 CIAVSHFSGLNFIFLFINSRHSHRTELTHVFSMFCDHDLLRLCQSHLFIYI 267
           C+ +     ++++FL I   HS+  ++  V+ +FC   +   C   +FIYI
Sbjct: 135 CVLIVDIDIMSYMFLSIEGVHSYSNDILLVYDVFCT-SISTFCYVSVFIYI 184


>Z70781-1|CAA94835.1|  358|Caenorhabditis elegans Hypothetical
           protein F57A8.3 protein.
          Length = 358

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +1

Query: 91  LLYDSCIVCIAVSHFSGLNFIFLFINSRHSH 183
           +LY  C   IA S F  LNFI+ +++S HSH
Sbjct: 98  ILYCGCF--IASSSFLSLNFIYRYVSSCHSH 126


>CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical
           protein C42C1.8 protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 173 DTVTELNLPMFLVCFVTMIFLGC 241
           D V  LN+ +F++CFV + F GC
Sbjct: 244 DDVWILNVILFIICFVALFFAGC 266


>Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical
           protein K09A9.4 protein.
          Length = 716

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/79 (27%), Positives = 37/79 (46%)
 Frame = -2

Query: 255 QVALTQPKKIMVTKHTKNMGKFSSVTVSTXXXXXXXXEAREVADSYANNARIIEKQLERK 76
           QVA +QP  +M  KHT N G+  S++ +T          R  +D  +    +I K L+  
Sbjct: 534 QVAKSQPYILMYRKHTTN-GE-PSISQNTESPFNFFASRRLFSDRDSEAWDVIRKCLDED 591

Query: 75  GMNKRQAETPAHTLEKRPR 19
           G  K+ A +    + K+ +
Sbjct: 592 GKEKKVAGSSRKNIRKKKK 610


>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 312 IDGAL-VQTPGEGGVTDIYKQVALTQPKKIMVTKHTKNMGKF 190
           +DGAL V TP E  + D+ K+V+     K+ +    +NM +F
Sbjct: 197 LDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILGVVENMARF 238


>Z32679-3|CAA83596.1|  401|Caenorhabditis elegans Hypothetical
           protein C05B5.3 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 230 FLGCVKATCLYISVTPPSPGVWTNAPSI 313
           + GC  + C+  ++ P S G W NA  I
Sbjct: 36  YAGCSSSGCVPATIVPKSSGFWPNADMI 63


>AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical
           protein C16A11.3 protein.
          Length = 726

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 574 TFTYLLLFVRPDVSHIRLYDRQITVKTLRQCKSHRWIETRSQNYFRP 434
           T T  + F++P + H+ + D     +T+RQ K  ++   ++QNY  P
Sbjct: 545 TVTGNVCFIQPSIFHVCVVDFG-NARTIRQDKPPKYALVQTQNYRAP 590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,805,397
Number of Sequences: 27780
Number of extensions: 354903
Number of successful extensions: 936
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)