Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_J16
         (301 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              26   0.12 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   1.1  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   4.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   4.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   4.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   5.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   5.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   5.7  

>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 25.8 bits (54), Expect = 0.12
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 132 CPAGTMNPWRL-FINLFRMKLKNSCYARSLK 43
           CP GT NP  L  +N F++ L+NS   R +K
Sbjct: 91  CPKGTKNPGTLATVNAFKL-LRNSMGKRRVK 120


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 146 GSPLSTPAGCESELGFGHYEAS 211
           GS + TP     EL  GHY++S
Sbjct: 752 GSIVGTPVHMAPELLSGHYDSS 773


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 146 GSPLSTPAGCESELGFGHYEAS 211
           GS + TP     EL  GHY++S
Sbjct: 790 GSIVGTPVHMAPELLSGHYDSS 811


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 71  KTPAMPEALSRHHRNRNTDK 12
           KT A+P  L+RH+R    +K
Sbjct: 99  KTFAVPARLTRHYRTHTGEK 118


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +2

Query: 80  ILNKFINXRQGFIVPA----GHSAGDGSPLSTPAGCESELGF 193
           ++ K++N  + F   +    GH AG+ S +S       E+GF
Sbjct: 192 LVEKWVNSSEIFYTTSQQYYGHFAGNFSSISITFKLAREMGF 233


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 203 HNGRSPTHFHIQLGWKE 153
           H+G+S +H H    W +
Sbjct: 397 HSGQSSSHHHGSKSWTQ 413


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 93  NLFRMKLKNSCYARS 49
           N++++ LKN  Y RS
Sbjct: 674 NMYKLDLKNMKYTRS 688


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 47  LSRHHRNRNTDKM 9
           LS H  N N+DKM
Sbjct: 224 LSSHTLNHNSDKM 236


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 189 PNSLSHPAGVERGLPSPALCPAGTMNP 109
           P  LS P G  +G P   L    + NP
Sbjct: 622 PARLSLPKGQPQGFPLQFLVVISSSNP 648


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 151 AAIAGTVSCRNDESLA 104
           AA AG  SCR   SLA
Sbjct: 140 AATAGDKSCRYTASLA 155


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,487
Number of Sequences: 438
Number of extensions: 1721
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)