Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_J13
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110420-1|AAI10421.1|   90|Homo sapiens COX19 cytochrome c oxid...    99   9e-21
BC103632-1|AAI03633.1|   90|Homo sapiens COX19 cytochrome c oxid...    99   9e-21
BC070383-1|AAH70383.1|   90|Homo sapiens COX19 cytochrome c oxid...    99   9e-21
AY957566-1|AAY35062.1|   90|Homo sapiens COX19 protein.                99   9e-21

>BC110420-1|AAI10421.1|   90|Homo sapiens COX19 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 90

 Score = 99.1 bits (236), Expect = 9e-21
 Identities = 46/78 (58%), Positives = 51/78 (65%)
 Frame = -1

Query: 349 MSTAMTFGQKQFIPTPPDKGSFPLDHEGICKKTMVRYMKCLIXXXXXXSLCRDEAKEYLA 170
           MSTAM FG K F P PPDKGSFPLDH G CK    ++MKCL       +LCR E+KEYL 
Sbjct: 1   MSTAMNFGTKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYLE 60

Query: 169 CRMENNLMAKEDWNNLGF 116
           CRME  LM +E    LGF
Sbjct: 61  CRMERKLMLQEPLEKLGF 78


>BC103632-1|AAI03633.1|   90|Homo sapiens COX19 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 90

 Score = 99.1 bits (236), Expect = 9e-21
 Identities = 46/78 (58%), Positives = 51/78 (65%)
 Frame = -1

Query: 349 MSTAMTFGQKQFIPTPPDKGSFPLDHEGICKKTMVRYMKCLIXXXXXXSLCRDEAKEYLA 170
           MSTAM FG K F P PPDKGSFPLDH G CK    ++MKCL       +LCR E+KEYL 
Sbjct: 1   MSTAMNFGTKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYLE 60

Query: 169 CRMENNLMAKEDWNNLGF 116
           CRME  LM +E    LGF
Sbjct: 61  CRMERKLMLQEPLEKLGF 78


>BC070383-1|AAH70383.1|   90|Homo sapiens COX19 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 90

 Score = 99.1 bits (236), Expect = 9e-21
 Identities = 46/78 (58%), Positives = 51/78 (65%)
 Frame = -1

Query: 349 MSTAMTFGQKQFIPTPPDKGSFPLDHEGICKKTMVRYMKCLIXXXXXXSLCRDEAKEYLA 170
           MSTAM FG K F P PPDKGSFPLDH G CK    ++MKCL       +LCR E+KEYL 
Sbjct: 1   MSTAMNFGTKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYLE 60

Query: 169 CRMENNLMAKEDWNNLGF 116
           CRME  LM +E    LGF
Sbjct: 61  CRMERKLMLQEPLEKLGF 78


>AY957566-1|AAY35062.1|   90|Homo sapiens COX19 protein.
          Length = 90

 Score = 99.1 bits (236), Expect = 9e-21
 Identities = 46/78 (58%), Positives = 51/78 (65%)
 Frame = -1

Query: 349 MSTAMTFGQKQFIPTPPDKGSFPLDHEGICKKTMVRYMKCLIXXXXXXSLCRDEAKEYLA 170
           MSTAM FG K F P PPDKGSFPLDH G CK    ++MKCL       +LCR E+KEYL 
Sbjct: 1   MSTAMNFGTKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYLE 60

Query: 169 CRMENNLMAKEDWNNLGF 116
           CRME  LM +E    LGF
Sbjct: 61  CRMERKLMLQEPLEKLGF 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,345,371
Number of Sequences: 237096
Number of extensions: 1102801
Number of successful extensions: 1539
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)