Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_J11
         (939 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098997-14|AAK71402.1|  321|Caenorhabditis elegans Serpentine r...    31   0.90 
Z75529-5|CAA99784.1|  610|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa...    29   3.6  
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as...    29   3.6  
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr...    29   4.8  
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro...    29   4.8  
AF078157-16|AAG24082.1|  343|Caenorhabditis elegans Serpentine r...    28   8.4  

>AF098997-14|AAK71402.1|  321|Caenorhabditis elegans Serpentine
           receptor, class i protein32 protein.
          Length = 321

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
 Frame = -1

Query: 702 YRAMGIITL---VIALWLLMF--YSLN*IKYAYLMYDVRMCLFNLELSMI*ESMPL 550
           Y ++G I+L   VI + L++F  Y L+  KY  L Y V    + L+L+++ + MPL
Sbjct: 15  YYSIGFISLIFNVITILLIVFKSYKLDSFKYYLLAYQVSCANYVLQLTILFQPMPL 70


>Z75529-5|CAA99784.1|  610|Caenorhabditis elegans Hypothetical
           protein C44H9.6 protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 80  CLH-LAPT-LSKNHLHNSXQRGHVFCTQTLADFSSDMSKLTAVN 205
           C++ L PT LSK H + + Q GH FC   L + +  M    + N
Sbjct: 56  CINALIPTNLSKGHRYTAQQNGHSFCHSYLQNITETMGADESTN 99


>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
           protein kinase protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 83  LHLAPTLSKNHLHNSXQRGHVFCTQTLADFSS 178
           LHL     +  LH +  RGHV C Q L D +S
Sbjct: 518 LHLRNIREETPLHVAAARGHVDCVQALLDANS 549


>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
           (death-associated protein)kinase homolog protein 1
           protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 83  LHLAPTLSKNHLHNSXQRGHVFCTQTLADFSS 178
           LHL     +  LH +  RGHV C Q L D +S
Sbjct: 518 LHLRNIREETPLHVAAARGHVDCVQALLDANS 549


>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
           protein F52E10.1 protein.
          Length = 1201

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 939 NVFYFWKFKNCVX*MNIVPIDRYLVKTELPSL*ILVWYVCIS 814
           N+F  W+  +C   +   P+D+YL  TEL +L  LV    IS
Sbjct: 282 NLFKHWRL-HCEEVIAYTPVDQYLSNTELATLAWLVLQTTIS 322


>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
           protein protein.
          Length = 1203

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 939 NVFYFWKFKNCVX*MNIVPIDRYLVKTELPSL*ILVWYVCIS 814
           N+F  W+  +C   +   P+D+YL  TEL +L  LV    IS
Sbjct: 284 NLFKHWRL-HCEEVIAYTPVDQYLSNTELATLAWLVLQTTIS 324


>AF078157-16|AAG24082.1|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein89 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 766 YQIFCDFYSFDIDSLRIVFV*I*SYGYYHIG 674
           +  FC F  F  ++L I ++ + S+GY  +G
Sbjct: 69  FNFFCTFQDFQFNTLTIPYIFLPSFGYLGLG 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,400,599
Number of Sequences: 27780
Number of extensions: 350802
Number of successful extensions: 662
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)