Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_J07
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0228 + 21497248-21498143,21499831-21501700,21501934-215020... 32 0.50
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 32 0.50
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 32 0.67
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 31 0.88
11_04_0236 + 15215386-15216197,15216854-15218888,15219131-152200... 31 1.5
11_03_0025 + 9047646-9047958,9048150-9048474,9049833-9051828,905... 31 1.5
08_01_0470 - 4140669-4140728,4142004-4142270,4142526-4144557,414... 31 1.5
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 31 1.5
09_04_0422 + 17422080-17422217,17422886-17423067,17423145-174233... 30 2.0
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 30 2.0
02_05_0177 + 26505956-26506202,26506838-26507247,26507448-265076... 30 2.0
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129... 29 3.6
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 29 4.7
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 29 4.7
08_01_0463 - 4075037-4075316,4075997-4076151,4076818-4078861,408... 29 4.7
08_01_0466 + 4105524-4105812,4105975-4106356,4107042-4109073 29 6.2
05_01_0103 + 686770-687017,687120-687270 29 6.2
11_06_0227 + 21475954-21476771,21477215-21479144,21479292-214794... 28 8.2
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 28 8.2
03_05_0502 + 24947444-24947665,24947768-24947823,24947929-249480... 28 8.2
>11_06_0228 +
21497248-21498143,21499831-21501700,21501934-21502038,
21502139-21502232,21502335-21502363
Length = 997
Score = 32.3 bits (70), Expect = 0.50
Identities = 35/164 (21%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Frame = -2
Query: 826 PTEWAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFG--YLRLQMGDEMSKRKKFMFMT 653
P++W + K C +R T R ++ + FG Y+ + D+ SK + +
Sbjct: 310 PSKWNIIKLALIDSSCGSRVITTTRIRQVANEVAKEFGDVYMMEPLSDDNSKTLFYNRIF 369
Query: 652 WVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQ-FKDALNRAGGANYGT 476
V N N++ +T+K I+K + L + + + +D+ ++ ++GT
Sbjct: 370 GVACNGPTDNQSVEATEK-ILKRC---GGIPLSIITIASLLVDKPAREWSVIYDSISFGT 425
Query: 475 GVRDL*IENVCPELATWNFKRILSLSFYYINNECKDTILYIKIF 344
G ++ ++N+ ++ILS S+Y++ + K +LY+ I+
Sbjct: 426 GDQNEAVQNM---------RKILSFSYYHLPSYLKTCMLYLSIY 460
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = -2
Query: 769 GSDFTEFRTQFSDDERAFGYLRLQ-MGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAI 593
G + +F DE + + DE ++ K F++W V ++ ++ K
Sbjct: 69 GESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDR 128
Query: 592 IKDIISNFAVELQLENQSEIDIDQFK 515
K + VELQ + SE+ +D K
Sbjct: 129 FKRELDGIQVELQATDPSEMSMDIVK 154
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 424 NFKRILSLSFYYINNECKDTILYIKIF 344
N RILSLSF+ + N K +LY+ IF
Sbjct: 402 NMNRILSLSFHDLPNHLKTCLLYLSIF 428
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 31.5 bits (68), Expect = 0.88
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -2
Query: 691 DEMSKRKKFMFMTWVGPNVSVINRAKM--STDKAIIKDIISNFAVELQLENQSEIDIDQF 518
+E ++ K F+ W P+VS I RAKM +T K + + E+Q + SE+DI+
Sbjct: 83 EENCQKSKIFFVAW-SPSVSRI-RAKMLYATSKERFRRELDGVHYEIQATDPSELDIELL 140
Query: 517 KD 512
++
Sbjct: 141 RE 142
>11_04_0236 +
15215386-15216197,15216854-15218888,15219131-15220017,
15222420-15226194
Length = 2502
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 424 NFKRILSLSFYYINNECKDTILYIKIF 344
N +RILS +Y++ + K +LYI IF
Sbjct: 400 NIRRILSFCYYHLPSHLKTCLLYISIF 426
>11_03_0025 +
9047646-9047958,9048150-9048474,9049833-9051828,
9051991-9052190,9052851-9052899
Length = 960
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 421 FKRILSLSFYYINNECKDTILYIKIF 344
F+RIL LSFY + ++ K LY+ IF
Sbjct: 349 FRRILMLSFYDLPHDLKTCFLYLSIF 374
>08_01_0470 -
4140669-4140728,4142004-4142270,4142526-4144557,
4144763-4145550
Length = 1048
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 424 NFKRILSLSFYYINNECKDTILYIKIF 344
N +RILS S+Y + + K ILYI IF
Sbjct: 392 NTRRILSFSYYDLPSHLKPCILYISIF 418
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 194 NTHIICFSVVLIRIYQXKXRXAGVHXXKRGERIDF 90
N H IC + VL++ Y+ K + + GER+DF
Sbjct: 420 NPHFICDARVLVKPYKEKGKVPDKKQHQPGERVDF 454
>09_04_0422 +
17422080-17422217,17422886-17423067,17423145-17423331,
17423602-17423769,17423915-17424217,17424312-17424497
Length = 387
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 518 ELVDVYLRLIFKLQLHSKVRYDVLDDSFVGGHLGSVD 628
++VD+++ +FK+ LHS+ Y + D + G L SVD
Sbjct: 303 DMVDIHIAAVFKV-LHSEQNYLRIQDDTLEGTLASVD 338
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -2
Query: 424 NFKRILSLSFYYINNECKDTILYIKIF---YKWILGHIL 317
N KRILS S+Y + + K+ +LY+ +F YK H++
Sbjct: 681 NTKRILSFSYYDLPSHLKNCLLYLSMFPEDYKIDKNHLI 719
>02_05_0177 +
26505956-26506202,26506838-26507247,26507448-26507624,
26507775-26507999,26508089-26508265,26508357-26508593,
26508855-26508944,26509102-26509254
Length = 571
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 497 CPIECILELVDVYLRLIFKLQLHSKV--RYDVLDDSFVGGHLGSVDHRHVRSYPRHEHKF 670
CP I+ +V V+ ++ QLH + R+ +L VG + G + V S H H
Sbjct: 501 CPGVPIVPMVSVFFNMLLFAQLHEEAWYRFVILSLLAVGVYAGYGQYHAVPSSSDHPHPA 560
Query: 671 LAFRHLVS 694
+A+ + S
Sbjct: 561 VAYHGIPS 568
>01_06_0944 +
33211652-33212427,33212492-33212660,33212825-33212936,
33213061-33213159,33213237-33213394,33214911-33215062,
33215162-33215249,33215399-33215476,33215516-33215690,
33216701-33217002
Length = 702
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 430 TWNFKRILSLSFYYINNECKDTILYIKIFYKWILGHILIGA 308
++NF S+SF Y++N+ + T+ Y I ++ + +GA
Sbjct: 225 SYNFTESESMSFLYVSNDARTTLSYSSIPASGMVSGLCLGA 265
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 768 PLAEHTIRAPSNLNTAHSVGVVSD 839
P+ +H APS + AH +G++SD
Sbjct: 229 PVTDHNFDAPSKIPFAHGMGLISD 252
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 424 NFKRILSLSFYYINNECKDTILYIKIF 344
N +RILSLS+Y + K +LY+ IF
Sbjct: 414 NTRRILSLSYYDLPLHLKPCLLYLSIF 440
>08_01_0463 -
4075037-4075316,4075997-4076151,4076818-4078861,
4080757-4081589
Length = 1103
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 424 NFKRILSLSFYYINNECKDTILYIKIF 344
N +RILSLS+Y + K +LY+ IF
Sbjct: 423 NTRRILSLSYYDLPLHLKPCLLYLSIF 449
>08_01_0466 + 4105524-4105812,4105975-4106356,4107042-4109073
Length = 900
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 424 NFKRILSLSFYYINNECKDTILYIKIF 344
N +RILS S+Y + + K +LY+ IF
Sbjct: 353 NTRRILSFSYYDLPSHLKACLLYLSIF 379
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -2
Query: 691 DEMSKRKKFMFMTWVGPNVSVINRAKM--STDKAIIKDIISNFAVELQLENQSEIDIDQF 518
+E ++ K F+ W P+ S + R+KM ++ K K + VELQ + +E+ +D
Sbjct: 70 EENCQKSKIFFIAW-SPDTSRV-RSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVI 127
Query: 517 KDALN 503
+ N
Sbjct: 128 RGRAN 132
>11_06_0227 +
21475954-21476771,21477215-21479144,21479292-21479426,
21480287-21480392,21480560-21480576
Length = 1001
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 433 ATWNFKRILSLSFYYINNECKDTILYIKIF 344
A N ++ILS S+Y++ + K +LY+ I+
Sbjct: 405 AVQNTRKILSFSYYHLPSYLKTCMLYLSIY 434
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 688 EMSKRKKFMFMTWVGPNVSVINRAKM--STDKAIIKDIISNFAVELQLENQSE 536
E ++ K F+ W P+ S I RAKM ST K IK + F E+Q + +E
Sbjct: 84 ENVQKSKIFFIAW-SPSTSRI-RAKMLYSTSKDRIKQELDGFHYEIQATDPTE 134
>03_05_0502 +
24947444-24947665,24947768-24947823,24947929-24948099,
24948508-24948631,24949086-24949142,24949216-24949312,
24949619-24949826,24950637-24950697,24950793-24950846
Length = 349
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 621 RLITDTFGPTHVMNINFLRLDISSPI-CNLRYPNARSSSENCVRNSVKSLPLAEH 782
RL++ HV+N N LD+++P+ NL PN + + V+ L L +H
Sbjct: 237 RLVSFKGKTIHVLNKNEHALDMAAPVHDNLGDPNGYTDDYSLVKKRTNVLLLGDH 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,670,382
Number of Sequences: 37544
Number of extensions: 447359
Number of successful extensions: 995
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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