Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_J07
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z93393-9|CAB07695.1|  190|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z48717-8|CAA88609.1|  518|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z48717-1|CAA88603.1|  520|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z70311-3|CAA94372.1|  546|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical
           protein F09E5.5 protein.
          Length = 796

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +2

Query: 536 LRLIFKLQLHSKVRYDVLDDSFVGGHLGSVDHRHVRSYPRHEHKFLAFRHLVSHLQPEVS 715
           L+ IF LQ   +   D LDD   GG+L  + H+H+    R   + LA  H +S    E  
Sbjct: 113 LKHIFNLQTTLQEIRDALDDEKSGGNL-LLAHKHIMDLERARDELLAEVHKMSGTNTEKE 171

Query: 716 ECAFI 730
           +   +
Sbjct: 172 QMLLV 176


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
 Frame = +3

Query: 504 LSASLNWSMSISD*FSSCNSTAKFDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLD 683
           +S++L W  +I+    S   +    + S   A  +  ++R + D    + + + N + + 
Sbjct: 398 ISSNL-WKPTINSPTMSTTESTISPVASSPTASKLPFVSRKVDDVGAKSMITSSNVVSIS 456

Query: 684 ISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLNTA-HSVGVVS 836
           + +P+ N  Y N   + E    +   + PL      +PS  +T+ +SV + S
Sbjct: 457 VKAPVSNRIYSNYDKTDETTTDSMRSTAPLKPPITYSPSYTSTSLNSVSLSS 508


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
 Frame = +3

Query: 504 LSASLNWSMSISD*FSSCNSTAKFDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLD 683
           +S++L W  +I+    S   +    + S   A  +  ++R + D    + + + N + + 
Sbjct: 441 ISSNL-WKPTINSPTMSTTESTISPVASSPTASKLPFVSRKVDDVGAKSMITSSNVVSIS 499

Query: 684 ISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLNTA-HSVGVVS 836
           + +P+ N  Y N   + E    +   + PL      +PS  +T+ +SV + S
Sbjct: 500 VKAPVSNRIYSNYDKTDETTTDSMRSTAPLKPPITYSPSYTSTSLNSVSLSS 551


>Z93393-9|CAB07695.1|  190|Caenorhabditis elegans Hypothetical
           protein Y48E1B.11 protein.
          Length = 190

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +2

Query: 404 RQYSFKIPCGKFGANIFYS*ISNASAVVRSP--CPIECILELVDVYL 538
           ++Y+F I   + GAN+ +  +     ++ SP     E   +LVD YL
Sbjct: 57  KKYNFNIQTAQLGANVLFGGVQQFGILIASPEDSQTETFRKLVDFYL 103


>Z48717-8|CAA88609.1|  518|Caenorhabditis elegans Hypothetical
           protein T10B9.10 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = -2

Query: 739 FSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVE 560
           + DD   F   R + GDE+   K       +GP + +  R  M   K ++ +I+ N+  E
Sbjct: 429 WGDDVNEFKPERWESGDELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFE 488


>Z48717-1|CAA88603.1|  520|Caenorhabditis elegans Hypothetical
           protein T10B9.1 protein.
          Length = 520

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = -2

Query: 739 FSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVE 560
           + DD   F   R + GDE+   K       +GP + +  R  M  +K ++  I+  +  +
Sbjct: 429 WGDDASEFKPERWETGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFD 488

Query: 559 LQLENQ 542
              E +
Sbjct: 489 TSTETE 494


>Z70311-3|CAA94372.1|  546|Caenorhabditis elegans Hypothetical
           protein T25B9.4 protein.
          Length = 546

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -2

Query: 649 VGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANYGTGV 470
           V  ++  ++ AK  T K I+K + +   VEL L+   + DID   +  N        +  
Sbjct: 364 VKKSIYQLDPAKRDTMKVIVKKLETWLDVELVLDENEKPDIDPESNRFNGNMPIRVDSST 423

Query: 469 RDL*IENVC---PELAT 428
           + +  + VC   PE AT
Sbjct: 424 KKMRNDTVCIPPPETAT 440


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,930,853
Number of Sequences: 27780
Number of extensions: 408118
Number of successful extensions: 983
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)