Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_J02
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 29 3.1
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23182-2|ABD94105.1| 441|Caenorhabditis elegans Hypothetical pr... 29 4.1
U23182-1|ABD94104.1| 468|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL031630-11|CAA21001.1| 334|Caenorhabditis elegans Hypothetical... 29 5.4
AF039712-2|AAK21401.1| 401|Caenorhabditis elegans Hypothetical ... 29 5.4
Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical pr... 28 7.2
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 652 FSGQWIMYLLLPNMYLFMFSIRLMFNLFILTYSVLIQSLNA 530
FS W+ + L + F+I L F +F LT+++LI N+
Sbjct: 474 FSRDWLDGVSLSVSFALFFAIFLFFGMFSLTFTMLIAISNS 514
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 652 FSGQWIMYLLLPNMYLFMFSIRLMFNLFILTYSVLIQSLNA 530
FS W+ + L + F+I L F +F LT+++LI N+
Sbjct: 474 FSRDWLDGVSLSVSFALFFAIFLFFGMFSLTFTMLIAISNS 514
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 652 FSGQWIMYLLLPNMYLFMFSIRLMFNLFILTYSVLIQSLNA 530
FS W+ + L + F+I L F +F LT+++LI N+
Sbjct: 474 FSRDWLDGVSLSVSFALFFAIFLFFGMFSLTFTMLIAISNS 514
>U23182-2|ABD94105.1| 441|Caenorhabditis elegans Hypothetical
protein F40B5.2b protein.
Length = 441
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 416 NSKLRLECFKDNCVGLTVVKIY-SKIAIFYYHL 511
N +LRL CF+D L ++ ++ S IA+F+Y++
Sbjct: 74 NRRLRLICFQDIAQALMMLFLFLSHIAMFFYYI 106
>U23182-1|ABD94104.1| 468|Caenorhabditis elegans Hypothetical
protein F40B5.2a protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 416 NSKLRLECFKDNCVGLTVVKIY-SKIAIFYYHL 511
N +LRL CF+D L ++ ++ S IA+F+Y++
Sbjct: 101 NRRLRLICFQDIAQALMMLFLFLSHIAMFFYYI 133
>AL031630-11|CAA21001.1| 334|Caenorhabditis elegans Hypothetical
protein Y38H6C.12 protein.
Length = 334
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/80 (17%), Positives = 37/80 (46%)
Frame = +2
Query: 287 NTINIKTLIISL*YEKFQINLSINCINLDKFYVLFCQFYPANLNSKLRLECFKDNCVGLT 466
N N++T ++ L +++ ++C+ + F + C YP + + L + VG++
Sbjct: 44 NMKNVRTNMLVLHLAGALLDIYMSCLEIPVFLLPACAVYPLGVLTMLGVSTVFQAYVGVS 103
Query: 467 VVKIYSKIAIFYYHLIYSSL 526
++ + + ++ Y L
Sbjct: 104 LIGVIGMAILMFFEERYHKL 123
>AF039712-2|AAK21401.1| 401|Caenorhabditis elegans Hypothetical
protein F54D7.3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = +2
Query: 326 YEKFQINLSIN---CINLDKFYVLFCQFY 403
++ F I+LS+N CI LD+FY +F Y
Sbjct: 100 FDVFAISLSMNVLICITLDRFYSIFFPLY 128
>Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical
protein M117.6 protein.
Length = 124
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 652 FSGQWIMYLLLPNMYLFMFSIRLMFNLFILTYSVLIQSLNAF 527
F GQW+ L LF F + F++F L S I N F
Sbjct: 12 FLGQWLRTPLEQLFLLFFFPNLMEFSVFFLAKSTFILIFNVF 53
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 431 LECFKDNCVGLTVVKIYSKIAIFYYHLIYSSLKCVERL 544
+E K + G+ V+K Y K +HL Y+S KC + L
Sbjct: 420 VEKLKQSRSGVAVLKNYVKWKTIMFHLAYASPKCRDGL 457
>Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 431 LECFKDNCVGLTVVKIYSKIAIFYYHLIYSSLKCVERL 544
+E K + G+ V+K Y K +HL Y+S KC + L
Sbjct: 384 VEKLKQSRSGVAVLKNYVKWKTIMFHLAYASPKCRDGL 421
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 431 LECFKDNCVGLTVVKIYSKIAIFYYHLIYSSLKCVERL 544
+E K + G+ V+K Y K +HL Y+S KC + L
Sbjct: 420 VEKLKQSRSGVAVLKNYVKWKTIMFHLAYASPKCRDGL 457
>Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 431 LECFKDNCVGLTVVKIYSKIAIFYYHLIYSSLKCVERL 544
+E K + G+ V+K Y K +HL Y+S KC + L
Sbjct: 384 VEKLKQSRSGVAVLKNYVKWKTIMFHLAYASPKCRDGL 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,108
Number of Sequences: 27780
Number of extensions: 279726
Number of successful extensions: 561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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