Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_I24
(469 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CT841508-1|CAJ86438.1| 939|Homo sapiens AP1B1 protein. 91 2e-18
BC046242-1|AAH46242.1| 919|Homo sapiens AP1B1 protein protein. 91 2e-18
M34175-1|AAA35583.1| 937|Homo sapiens protein ( Human beta adap... 88 2e-17
BC012150-1|AAH12150.1| 556|Homo sapiens Unknown (protein for IM... 88 2e-17
BC006201-1|AAH06201.1| 951|Homo sapiens adaptor-related protein... 88 2e-17
AY341427-1|AAQ20044.1| 880|Homo sapiens beta adaptin subunit pr... 88 2e-17
U36268-1|AAC50684.2| 949|Homo sapiens beta-prime-adaptin protein. 85 2e-16
L13939-1|AAC98702.1| 949|Homo sapiens beta-prime-adaptin protein. 85 2e-16
BX537680-1|CAD97809.1| 180|Homo sapiens hypothetical protein pr... 65 1e-10
BC090933-1|AAH90933.1| 1102|Homo sapiens ADNP protein protein. 30 3.5
BC075794-1|AAH75794.1| 1102|Homo sapiens activity-dependent neur... 30 3.5
AL034553-1|CAB53748.2| 1102|Homo sapiens activity-dependent neur... 30 3.5
AF250860-1|AAG47651.1| 1102|Homo sapiens activity-dependent neur... 30 3.5
AB018327-1|BAA34504.1| 1073|Homo sapiens KIAA0784 protein protein. 30 3.5
>CT841508-1|CAJ86438.1| 939|Homo sapiens AP1B1 protein.
Length = 939
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRTVEVATCIFQAYEAIIKS 292
RNVEG DMLYQSLKLTN IWVL EL++QPGNP TLSLK R EV+ ++QAYE I+K+
Sbjct: 881 RNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTLSLKCRAPEVSQHVYQAYETILKN 939
>BC046242-1|AAH46242.1| 919|Homo sapiens AP1B1 protein protein.
Length = 919
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRTVEVATCIFQAYEAIIKS 292
RNVEG DMLYQSLKLTN IWVL EL++QPGNP TLSLK R EV+ ++QAYE I+K+
Sbjct: 861 RNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTLSLKCRAPEVSQHVYQAYETILKN 919
>M34175-1|AAA35583.1| 937|Homo sapiens protein ( Human beta adaptin
mRNA, complete cds. ).
Length = 937
Score = 87.8 bits (208), Expect = 2e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRTVEVATCIFQAYEAIIKS 292
RNVEG DMLYQSLKLTN IW+L EL++QPGNP TLSLK R EV+ I+Q Y++I+K+
Sbjct: 879 RNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN 937
>BC012150-1|AAH12150.1| 556|Homo sapiens Unknown (protein for
IMAGE:4558274) protein.
Length = 556
Score = 87.8 bits (208), Expect = 2e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRTVEVATCIFQAYEAIIKS 292
RNVEG DMLYQSLKLTN IW+L EL++QPGNP TLSLK R EV+ I+Q Y++I+K+
Sbjct: 498 RNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN 556
>BC006201-1|AAH06201.1| 951|Homo sapiens adaptor-related protein
complex 2, beta 1 subunit protein.
Length = 951
Score = 87.8 bits (208), Expect = 2e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRTVEVATCIFQAYEAIIKS 292
RNVEG DMLYQSLKLTN IW+L EL++QPGNP TLSLK R EV+ I+Q Y++I+K+
Sbjct: 893 RNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN 951
>AY341427-1|AAQ20044.1| 880|Homo sapiens beta adaptin subunit
protein.
Length = 880
Score = 87.8 bits (208), Expect = 2e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRTVEVATCIFQAYEAIIKS 292
RNVEG DMLYQSLKLTN IW+L EL++QPGNP TLSLK R EV+ I+Q Y++I+K+
Sbjct: 822 RNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN 880
>U36268-1|AAC50684.2| 949|Homo sapiens beta-prime-adaptin protein.
Length = 949
Score = 84.6 bits (200), Expect = 2e-16
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEAT---LSLKSRTVEVATCIFQAYEAII 298
RNVEG DMLYQSLKLTN IWVL EL++QPGNP T LSLK R EV+ ++QAYE I+
Sbjct: 888 RNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTDLELSLKCRAPEVSQHVYQAYETIL 947
Query: 297 KS 292
K+
Sbjct: 948 KN 949
>L13939-1|AAC98702.1| 949|Homo sapiens beta-prime-adaptin protein.
Length = 949
Score = 84.6 bits (200), Expect = 2e-16
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEAT---LSLKSRTVEVATCIFQAYEAII 298
RNVEG DMLYQSLKLTN IWVL EL++QPGNP T LSLK R EV+ ++QAYE I+
Sbjct: 888 RNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTDLELSLKCRAPEVSQHVYQAYETIL 947
Query: 297 KS 292
K+
Sbjct: 948 KN 949
>BX537680-1|CAD97809.1| 180|Homo sapiens hypothetical protein
protein.
Length = 180
Score = 65.3 bits (152), Expect = 1e-10
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = -2
Query: 468 RNVEGXDMLYQSLKLTNNIWVLLELKLQPGNPEATL 361
RNVEG DMLYQSLKLTN IWVL EL++QPGNP T+
Sbjct: 85 RNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTV 120
>BC090933-1|AAH90933.1| 1102|Homo sapiens ADNP protein protein.
Length = 1102
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 322 IPSLRSYNQIVISNLNCVCIFCN*SIPVVKYVSRLFFYFLSVIYCLTAF 176
+P++ +Y + I N C++CN +P ++ + + LS YC + F
Sbjct: 474 VPAVANYI-MKIHNFTSKCLYCNRYLPTDTLLNHMLIHGLSCPYCRSTF 521
>BC075794-1|AAH75794.1| 1102|Homo sapiens activity-dependent
neuroprotector homeobox protein.
Length = 1102
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 322 IPSLRSYNQIVISNLNCVCIFCN*SIPVVKYVSRLFFYFLSVIYCLTAF 176
+P++ +Y + I N C++CN +P ++ + + LS YC + F
Sbjct: 474 VPAVANYI-MKIHNFTSKCLYCNRYLPTDTLLNHMLIHGLSCPYCRSTF 521
>AL034553-1|CAB53748.2| 1102|Homo sapiens activity-dependent
neuroprotector protein.
Length = 1102
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 322 IPSLRSYNQIVISNLNCVCIFCN*SIPVVKYVSRLFFYFLSVIYCLTAF 176
+P++ +Y + I N C++CN +P ++ + + LS YC + F
Sbjct: 474 VPAVANYI-MKIHNFTSKCLYCNRYLPTDTLLNHMLIHGLSCPYCRSTF 521
>AF250860-1|AAG47651.1| 1102|Homo sapiens activity-dependent
neuroprotective protein protein.
Length = 1102
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 322 IPSLRSYNQIVISNLNCVCIFCN*SIPVVKYVSRLFFYFLSVIYCLTAF 176
+P++ +Y + I N C++CN +P ++ + + LS YC + F
Sbjct: 474 VPAVANYI-MKIHNFTSKCLYCNRYLPTDTLLNHMLIHGLSCPYCRSTF 521
>AB018327-1|BAA34504.1| 1073|Homo sapiens KIAA0784 protein protein.
Length = 1073
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 322 IPSLRSYNQIVISNLNCVCIFCN*SIPVVKYVSRLFFYFLSVIYCLTAF 176
+P++ +Y + I N C++CN +P ++ + + LS YC + F
Sbjct: 445 VPAVANYI-MKIHNFTSKCLYCNRYLPTDTLLNHMLIHGLSCPYCRSTF 492
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,067,572
Number of Sequences: 237096
Number of extensions: 974217
Number of successful extensions: 2283
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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