Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_I17
(867 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 328 3e-90
03_01_0547 + 4093196-4093657,4094267-4095148 328 3e-90
03_01_0544 + 4082528-4082989,4083585-4084466 328 3e-90
03_01_0543 + 4076981-4077442,4078145-4079026 328 3e-90
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 90 2e-18
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 83 3e-16
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 83 3e-16
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 81 1e-15
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 76 4e-14
02_04_0462 + 23131433-23132836 67 1e-11
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 66 3e-11
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 31 1.2
04_04_0511 - 25800371-25800454,25800563-25800629,25800903-258010... 29 3.6
11_06_0516 + 24502645-24504507 29 4.8
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 6.4
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 29 6.4
07_03_0634 + 20125242-20125688 28 8.4
06_03_1165 - 28106604-28106915 28 8.4
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 8.4
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 328 bits (807), Expect = 3e-90
Identities = 148/199 (74%), Positives = 175/199 (87%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
DKP RLPLQDVY+IGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEA 290
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLD
Sbjct: 291 LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLD 350
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
CHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLG
Sbjct: 351 CHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLG 410
Query: 327 RFAVRDMRQTVAVGVIKAV 271
RFAVRDMRQTVAVGVIK V
Sbjct: 411 RFAVRDMRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 328 bits (807), Expect = 3e-90
Identities = 148/199 (74%), Positives = 175/199 (87%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
DKP RLPLQDVY+IGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEA 290
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLD
Sbjct: 291 LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLD 350
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
CHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLG
Sbjct: 351 CHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLG 410
Query: 327 RFAVRDMRQTVAVGVIKAV 271
RFAVRDMRQTVAVGVIK V
Sbjct: 411 RFAVRDMRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 328 bits (807), Expect = 3e-90
Identities = 148/199 (74%), Positives = 175/199 (87%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
DKP RLPLQDVY+IGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEA 290
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLD
Sbjct: 291 LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLD 350
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
CHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLG
Sbjct: 351 CHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLG 410
Query: 327 RFAVRDMRQTVAVGVIKAV 271
RFAVRDMRQTVAVGVIK V
Sbjct: 411 RFAVRDMRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 328 bits (807), Expect = 3e-90
Identities = 148/199 (74%), Positives = 175/199 (87%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
DKP RLPLQDVY+IGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA
Sbjct: 231 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEA 290
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++NHPGQI NGY PVLD
Sbjct: 291 LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLD 350
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
CHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLG
Sbjct: 351 CHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLG 410
Query: 327 RFAVRDMRQTVAVGVIKAV 271
RFAVRDMRQTVAVGVIK V
Sbjct: 411 RFAVRDMRQTVAVGVIKNV 429
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 89.8 bits (213), Expect = 2e-18
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Frame = -1
Query: 861 PXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVP 682
P R+P+ D Y+ +GTV +G++E+G ++ G ++ P +V + + ++ A P
Sbjct: 227 PVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGP 284
Query: 681 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN--HPGQISNGYTPVLD 508
+NV + + +++ G+V S NP +F AQ+ +L + GY VL
Sbjct: 285 AENVRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLH 343
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-------IKSGDAAIVNLVPSKPLCVESF 349
H+ C+ ++ E++D + K + K +K+G + + + +C+E+F
Sbjct: 344 IHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNLICIENF 403
Query: 348 QEFPPLGRFAVR 313
+FP LGRF +R
Sbjct: 404 SDFPQLGRFTLR 415
>04_04_1015 - 30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 83.0 bits (196), Expect = 3e-16
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Frame = -1
Query: 864 KPXRLPLQDVYQIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
KP LP+ DV + G G++ETG ++ G+ V+ +P VKS+E + A
Sbjct: 478 KPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIA 537
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PKGAADFTA-QVIVLNHPGQISNGYTP 517
GDNV +++ + +L + G NP P ++F +V+VL+ I GY
Sbjct: 538 RAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQV 593
Query: 516 VLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 337
H A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 594 EFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCR 652
Query: 336 PLGRFAVRDMRQTVAVGVI 280
LGR +R T+AVGV+
Sbjct: 653 ALGRAFLRSSGSTIAVGVV 671
>04_04_1008 - 30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 83.0 bits (196), Expect = 3e-16
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Frame = -1
Query: 864 KPXRLPLQDVYQIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
KP LP+ DV + G G++ETG ++ G+ V+ +P VKS+E + A
Sbjct: 478 KPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIA 537
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PKGAADFTA-QVIVLNHPGQISNGYTP 517
GDNV +++ + +L + G NP P ++F +V+VL+ I GY
Sbjct: 538 RAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQV 593
Query: 516 VLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 337
H A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 594 EFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCR 652
Query: 336 PLGRFAVRDMRQTVAVGVI 280
LGR +R T+AVGV+
Sbjct: 653 ALGRAFLRSSGSTIAVGVV 671
>04_04_1593 - 34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 81.0 bits (191), Expect = 1e-15
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Frame = -1
Query: 864 KPXRLPLQDVYQIGGIGTVPVG-RVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
KP RLP+ DV+ +G V +G +VE G + G+ ++ P VK++E + + A
Sbjct: 462 KPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNSSSCNLA 521
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
GDNV ++ + + G V + P A+ +++VL+ I G
Sbjct: 522 RAGDNVAIGLQGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLDITVPILVGL----- 575
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
++ +I ++++TGK+++ P+ + S A++ + K +CVE F LG
Sbjct: 576 ----QVSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALG 631
Query: 327 RFAVRDMRQTVAVGVIKAV 271
R +R T+AVG++ V
Sbjct: 632 RVFLRSQGNTIAVGIVSRV 650
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 75.8 bits (178), Expect = 4e-14
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Frame = -1
Query: 861 PXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVP 682
P R+P+ D Y+ +GTV +G++E+G + G ++ P +V SV + ++ A P
Sbjct: 182 PVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAP 239
Query: 681 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN--HPGQISNGYTPVLD 508
G+NV + + ++ G+V K NP ++F AQ+ +L + GY VL
Sbjct: 240 GENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKAVLH 298
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIK 409
H+ C+ E+ E++D + K ++ K K
Sbjct: 299 IHSVVEECEIVELIEEIDLKRRKEGDIKKKKSK 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 67.3 bits (157), Expect = 1e-11
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 5/204 (2%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQ 694
D P L ++DV+ I G GTV GR+E G +K G V T V VEM + +
Sbjct: 276 DLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMD 335
Query: 693 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQIS---NGY 523
+A+ GDNVG ++ + ++ RG V + P D V+ + G+ S GY
Sbjct: 336 DAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDEGGRHSPFFPGY 395
Query: 522 TPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQE 343
P T + +I D K GD + + +P+ E
Sbjct: 396 RPQFYMRTTDVTGNVTKIMNDKDEEA--------KMCMPGDRVKMVVELIQPVACEQGM- 446
Query: 342 FPPLGRFAVRDMRQTVAVGVIKAV 271
RFA+R+ +TV GVI +
Sbjct: 447 -----RFAIREGGKTVGAGVINTI 465
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 66.1 bits (154), Expect = 3e-11
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPG---TIVVFAPAN-ITTEVKSVEMHHEA 700
DK +P++DV+ I G GTV GRVE G +K G I+ P+ + T V VEM +
Sbjct: 265 DKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKI 324
Query: 699 LQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYT 520
L GDNVG ++ + +++RG V K K F A++ VL +T
Sbjct: 325 LDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTK--DEGGRHT 380
Query: 519 PVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEF 340
L ++ + A++ KV G + ++ +G L+ PL
Sbjct: 381 AFLSNYSPQFYFRTADVTGKVVLPDGVEMVMPGDNVTAG----FELISPVPL-------- 428
Query: 339 PPLGRFAVRDMRQTVAVGVIKAV 271
P RFA+R+ +TV GV+ V
Sbjct: 429 EPGQRFALREGGRTVGAGVVSKV 451
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = -1
Query: 804 VGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 625
+G + + P TIV +P T KSVE +E L A G ++G + +
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYA 311
Query: 624 YVAGDS---KNNPPKGAADFTAQVIVLNH 547
+ G+ K + +F A++ VL H
Sbjct: 312 ELRGEKAAIKKMDMQATHEFLAELKVLTH 340
>04_04_0511 -
25800371-25800454,25800563-25800629,25800903-25801000,
25801094-25801152,25801247-25801379,25801461-25801532,
25801628-25801678,25802000-25802111,25802231-25802604
Length = 349
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = -1
Query: 759 VFAPANITTEVKSVEMHHEAL-QEAVPGDNVGFNV-KNVSVKELRRGYVAGDSKNNPPKG 586
+F P+ + SV +H + E + GDN ++ +N + + G V + N P G
Sbjct: 34 LFVPSGTMANLISVLVHCDTRGSEVILGDNSHIHIYENGGISTI--GGVHPKTVRNNPDG 91
Query: 585 AADFTAQVIVLNHP-GQISNGYTPVLDCHTAHIAC 484
D V+ + HP G + T ++ H C
Sbjct: 92 TMDIDKIVVAIRHPDGALYYPTTRLICLENTHANC 126
>11_06_0516 + 24502645-24504507
Length = 620
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -1
Query: 720 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 541
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 540 QISNG 526
+I G
Sbjct: 170 EIRRG 174
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 61 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 141
N M PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 555 LNHPGQISNGYTPVLDCHTAHIACKFAEIKE-KVDRRTGKSTEVNPKSI 412
L+ P +ISNG TPV D ++ C+ K D + + +EV+ S+
Sbjct: 271 LHRPRRISNGTTPVFDDNSGSHLCQDVSSKSFSADDQCLQDSEVDKDSV 319
>07_03_0634 + 20125242-20125688
Length = 148
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Frame = +2
Query: 170 CMKNCAVNS-SSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNS 346
C + A S S++ + A ++A T PP ++LT + L R P G
Sbjct: 35 CANSVAYLSLSAFVMSGRAVASAAATASPPVGVQLTVTSEHSEWSILSPRKTCHPTGKVK 94
Query: 347 WKDSTHRGLE---GTKLTMAASPDLMDFGLTSVDLP 445
WK +E GT P+ G +V LP
Sbjct: 95 WKGRREHFVERLVGTAHLPRRRPERQPQGSGAVPLP 130
>06_03_1165 - 28106604-28106915
Length = 103
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 730 SQVCGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 614
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 230 AALVTLPPPASLKLT-ALMTPTATVCLMSRTAKRPRGGNSWKDSTHRGLEGTKLTMAASP 406
A + L PA + A+ P TV + T ++ RG K +GL G KLT S
Sbjct: 266 ALIYPLVSPAVVSCDIAIAYPMPTVNPVESTPRKGRGRPRKKPVEIKGLSGIKLTEDLST 325
Query: 407 DLMDFGLTSVDLPVRR 454
L LT ++ +R
Sbjct: 326 ALSPIALTCMEPKKKR 341
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,952,771
Number of Sequences: 37544
Number of extensions: 525868
Number of successful extensions: 1702
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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